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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_011353454.1
porin
WP_021156477.1
porin
WP_021156938.1
porin
WP_021157340.1
porin
WP_021157443.1
porin
WP_021157564.1
porin
WP_021158488.1
porin
WP_021158633.1
3-hydroxyphenylpropionic acid porin
WP_021159191.1
porin
WP_021159922.1
porin
WP_021160470.1
porin
WP_021161478.1
porin
WP_021163930.1
porin
WP_027791358.1
porin
WP_042975541.1
porin
WP_042976372.1
porin
WP_046546627.1
porin
WP_048021900.1
porin
WP_048026346.1
porin
WP_059484266.1
porin
WP_059487078.1
porin
WP_059492309.1
porin
WP_059554812.1
porin
WP_059589968.1
porin
WP_059652508.1
porin
WP_059653825.1
porin
WP_059677335.1
porin
WP_059706073.1
porin
WP_059706532.1
porin
WP_059706871.1
porin
WP_059707154.1
porin
WP_059707511.1
porin
WP_059707690.1
porin
WP_059708059.1
porin
WP_059708322.1
porin
WP_059708377.1
porin
WP_059708394.1
porin
WP_059708490.1
porin
WP_059708511.1
porin
WP_059708814.1
porin
WP_059708873.1
porin
WP_059708892.1
porin
WP_059709110.1
porin
WP_059709116.1
porin
WP_059709127.1
porin
WP_059709213.1
porin
WP_059709599.1
porin
WP_059709780.1
porin
WP_059709829.1
porin
WP_059709878.1
porin
WP_059709884.1
porin
WP_059709929.1
porin
WP_059709978.1
porin
WP_059710221.1
porin
WP_059710412.1
porin
WP_059710420.1
porin
WP_059710489.1
porin
WP_059710592.1
porin
WP_059710669.1
porin
WP_081058026.1
porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
Contact
+43 1 4277 76681
+43 1 4277 876681
contact.cube@univie.ac.at