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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_011353454.1
porin
WP_021156477.1
porin
WP_021156938.1
porin
WP_021157443.1
porin
WP_021158030.1
porin
WP_021158488.1
porin
WP_021159191.1
porin
WP_021159922.1
porin
WP_021160535.1
porin
WP_021160709.1
porin
WP_021161478.1
porin
WP_021162863.1
porin
WP_021163930.1
porin
WP_027791358.1
porin
WP_042974289.1
porin
WP_042975541.1
porin
WP_042976372.1
porin
WP_048021672.1
porin
WP_048023443.1
porin
WP_048025427.1
porin
WP_059486986.1
porin
WP_059488534.1
porin
WP_059492309.1
porin
WP_059492320.1
porin
WP_059492598.1
porin
WP_059492753.1
porin
WP_059492841.1
porin
WP_059492916.1
porin
WP_059492948.1
porin
WP_059493340.1
porin
WP_059493632.1
porin
WP_059493684.1
porin
WP_059493831.1
porin
WP_059494170.1
porin
WP_059494378.1
porin
WP_059494534.1
porin
WP_059494600.1
porin
WP_059494649.1
porin
WP_059494764.1
porin
WP_059494794.1
porin
WP_059494810.1
porin
WP_059495140.1
porin
WP_059495234.1
porin
WP_059495399.1
porin
WP_059495597.1
porin
WP_059495599.1
porin
WP_059495636.1
porin
WP_059496321.1
porin
WP_059496501.1
porin
WP_059496779.1
porin
WP_059496848.1
porin
WP_059496980.1
porin
WP_059497004.1
porin
WP_059497071.1
porin
WP_059497530.1
porin
WP_059497893.1
porin
WP_059498015.1
porin
WP_081052512.1
porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
Contact
+43 1 4277 76681
+43 1 4277 876681
contact.cube@univie.ac.at