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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_011353454.1
porin
WP_021156477.1
porin
WP_021156938.1
porin
WP_021157443.1
porin
WP_021158030.1
porin
WP_021158238.1
porin
WP_021158633.1
3-hydroxyphenylpropionic acid porin
WP_021159191.1
porin
WP_021159922.1
porin
WP_021160709.1
porin
WP_021161478.1
porin
WP_021162030.1
porin
WP_021163930.1
porin
WP_042975541.1
porin
WP_042976372.1
porin
WP_048025427.1
porin
WP_048027890.1
porin
WP_059484717.1
porin
WP_059493831.1
porin
WP_059497071.1
porin
WP_059553444.1
porin
WP_059585774.1
porin
WP_059586079.1
porin
WP_059586113.1
porin
WP_059586169.1
porin
WP_059586440.1
porin
WP_059586729.1
porin
WP_059586783.1
porin
WP_059586797.1
porin
WP_059587156.1
porin
WP_059587299.1
porin
WP_059587455.1
porin
WP_059587825.1
porin
WP_059588258.1
porin
WP_059588808.1
porin
WP_059589094.1
porin
WP_059589183.1
porin
WP_059589189.1
porin
WP_059589294.1
porin
WP_059589378.1
porin
WP_059589398.1
porin
WP_059589458.1
porin
WP_059589595.1
porin
WP_059589968.1
porin
WP_059590048.1
porin
WP_059590597.1
porin
WP_059590986.1
porin
WP_059591013.1
porin
WP_059591243.1
porin
WP_059591272.1
porin
WP_059591368.1
porin
WP_059591800.1
porin
WP_063800591.1
porin
WP_081058699.1
porin
WP_081058798.1
porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
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contact.cube@univie.ac.at