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University of Vienna
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Dept of Microbiology and Ecosystem Science
CUBE
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SIMAP
Gepard
GenSkew
ConsPred
PICA
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_011354901.1
porin
WP_043177357.1
porin
WP_043177506.1
porin
WP_043177552.1
porin
WP_043178052.1
porin
WP_043178127.1
porin
WP_043178163.1
porin
WP_043178235.1
porin
WP_043178239.1
porin
WP_043178432.1
porin
WP_043178609.1
porin
WP_043178791.1
porin
WP_043179035.1
porin
WP_043179040.1
porin
WP_043179183.1
porin
WP_043179237.1
porin
WP_043179611.1
porin
WP_043179630.1
porin
WP_043179781.1
porin
WP_043179800.1
porin
WP_043180381.1
porin
WP_043180415.1
porin
WP_043180625.1
porin
WP_043180722.1
porin
WP_043180738.1
porin
WP_043180757.1
porin
WP_043180943.1
porin
WP_043181019.1
porin
WP_043181145.1
porin
WP_043181454.1
porin
WP_043181779.1
porin
WP_043182201.1
porin
WP_043182392.1
porin
WP_043182853.1
porin
WP_043183526.1
porin
WP_043183556.1
porin
WP_043183593.1
porin
WP_043183640.1
porin
WP_043183891.1
porin
WP_043183980.1
porin
WP_043184118.1
porin
WP_043184141.1
porin
WP_043184291.1
porin
WP_043184506.1
porin
WP_043184625.1
porin
WP_043184808.1
porin
WP_043185351.1
porin
WP_043185607.1
porin
WP_043185627.1
porin
WP_043185630.1
porin
WP_043185706.1
porin
WP_043186024.1
porin
WP_043186104.1
porin
WP_043186182.1
porin
WP_043186370.1
porin
WP_043186859.1
porin
WP_043187014.1
porin
WP_043187720.1
porin
WP_043187757.1
porin
WP_043188053.1
porin
WP_043188606.1
porin
WP_043189747.1
porin
WP_043191506.1
porin
WP_043192103.1
porin
WP_051889637.1
porin
WP_051889640.1
porin
WP_051889727.1
porin
WP_051889737.1
porin
WP_051890013.1
porin
WP_051890116.1
porin
WP_080741454.1
hypothetical protein
WP_080741635.1
porin
WP_080741684.1
hypothetical protein
WP_080741731.1
hypothetical protein
WP_080741811.1
hypothetical protein
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
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