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University of Vienna
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Dept of Microbiology and Ecosystem Science
CUBE
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SIMAP
Gepard
GenSkew
ConsPred
PICA
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Eukaryotic like proteins
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Genome: Paraburkholderia nodosa DSM 21604
Taxonomyid:
1121127
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_028201743.1
porin
WP_028202471.1
porin
WP_028202528.1
porin
WP_028202542.1
porin
WP_028202687.1
porin
WP_028202717.1
porin
WP_028202878.1
porin
WP_028202994.1
porin
WP_028202996.1
porin
WP_028203015.1
porin
WP_028203042.1
porin
WP_028203645.1
porin
WP_028203687.1
porin
WP_028203703.1
porin
WP_028203764.1
porin
WP_028203881.1
porin
WP_028203956.1
porin
WP_028203984.1
porin
WP_028204394.1
porin
WP_028204443.1
porin
WP_028204702.1
porin
WP_028204837.1
porin
WP_028205040.1
porin
WP_028205092.1
porin
WP_028205166.1
porin
WP_028205345.1
porin
WP_028205388.1
porin
WP_028205482.1
porin
WP_028205531.1
porin
WP_028206112.1
porin
WP_028206273.1
porin
WP_028206304.1
porin
WP_028206464.1
porin
WP_028206489.1
porin
WP_028206876.1
porin
WP_028207114.1
porin
WP_028207129.1
porin
WP_028207175.1
porin
WP_028207193.1
porin
WP_028207209.1
porin
WP_028207289.1
porin
WP_028207295.1
porin
WP_028207345.1
porin
WP_028207443.1
porin
WP_028207491.1
porin
WP_028207534.1
porin
WP_028207551.1
porin
WP_028207582.1
porin
WP_028207593.1
porin
WP_028207720.1
porin
WP_028207780.1
porin
WP_028208068.1
porin
WP_028208089.1
porin
WP_028208109.1
porin
WP_028208166.1
porin
WP_028208258.1
porin
WP_028208295.1
porin
WP_028208353.1
porin
WP_028208391.1
porin
WP_028208670.1
porin
WP_028208697.1
porin
WP_028208797.1
porin
WP_028208972.1
porin
WP_028209186.1
porin
WP_028209198.1
porin
WP_035513278.1
porin
WP_035513575.1
porin
WP_035514411.1
porin
WP_035514414.1
porin
WP_035514771.1
porin
WP_035515090.1
porin
WP_051481362.1
porin
WP_051481533.1
porin
WP_051481730.1
porin
WP_063750823.1
porin
WP_081771515.1
porin
WP_081771728.1
porin
WP_081771806.1
porin
WP_081771918.1
porin
WP_081771971.1
hypothetical protein
WP_081772112.1
porin
WP_081772117.1
hypothetical protein
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
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contact.cube@univie.ac.at