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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Gepard
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Eukaryotic like proteins
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Genome: Burkholderia cenocepacia HI2424
Taxonomyid:
331272
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_006480960.1
porin
WP_011544494.1
porin
WP_011545046.1
porin
WP_011545139.1
porin
WP_011545447.1
porin
WP_011545711.1
porin
WP_011545757.1
porin
WP_011545935.1
porin
WP_011546370.1
porin
WP_011546404.1
porin
WP_011546929.1
porin
WP_011547054.1
porin
WP_011547110.1
porin
WP_011547365.1
porin
WP_011547374.1
porin
WP_011547420.1
porin
WP_011547494.1
porin
WP_011547514.1
porin
WP_011547682.1
porin
WP_011547814.1
porin
WP_011547834.1
porin
WP_011548283.1
porin
WP_011548319.1
porin
WP_011548543.1
porin
WP_011548551.1
porin
WP_011548727.1
porin
WP_011548794.1
porin
WP_011548809.1
porin
WP_011548916.1
porin
WP_011549026.1
porin
WP_011549134.1
porin
WP_011549164.1
porin
WP_011549316.1
porin
WP_011549787.1
porin
WP_011549876.1
porin
WP_011549877.1
porin
WP_011694010.1
porin
WP_011694026.1
porin
WP_011694206.1
porin
WP_011694308.1
porin
WP_011694485.1
porin
WP_011694654.1
porin
WP_011694681.1
porin
WP_011694709.1
porin
WP_011694731.1
porin
WP_011694745.1
porin
WP_011694874.1
porin
WP_041489351.1
porin
WP_041489380.1
porin
WP_050809573.1
porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
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contact.cube@univie.ac.at