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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_011353454.1
porin
WP_021156477.1
porin
WP_021156938.1
porin
WP_021157443.1
porin
WP_021158238.1
porin
WP_021158488.1
porin
WP_021158633.1
3-hydroxyphenylpropionic acid porin
WP_021159262.1
porin
WP_021159922.1
porin
WP_021161184.1
porin
WP_021161478.1
porin
WP_021162030.1
porin
WP_021162863.1
porin
WP_021163930.1
porin
WP_027791358.1
porin
WP_042972722.1
porin
WP_042974289.1
porin
WP_042975541.1
porin
WP_048025892.1
porin
WP_048025994.1
porin
WP_051392276.1
porin
WP_059487078.1
porin
WP_059488826.1
porin
WP_059493831.1
porin
WP_059494810.1
porin
WP_059552336.1
porin
WP_059651796.1
porin
WP_059652508.1
porin
WP_059675652.1
porin
WP_059676730.1
porin
WP_059707154.1
porin
WP_059709110.1
porin
WP_059813132.1
porin
WP_059860729.1
porin
WP_060129847.1
porin
WP_060225017.1
porin
WP_060274686.1
porin
WP_060274812.1
porin
WP_060275190.1
porin
WP_060275505.1
porin
WP_060276737.1
porin
WP_060277091.1
porin
WP_060277697.1
porin
WP_060277744.1
porin
WP_060278285.1
porin
WP_060278347.1
porin
WP_060278428.1
porin
WP_060278999.1
porin
WP_060279859.1
porin
WP_060279937.1
porin
WP_060280187.1
porin
WP_060280470.1
porin
WP_063814381.1
porin
WP_081071753.1
porin
WP_081080066.1
porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
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contact.cube@univie.ac.at