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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_011353454.1
porin
WP_021156477.1
porin
WP_021156938.1
porin
WP_021157443.1
porin
WP_021158030.1
porin
WP_021158488.1
porin
WP_021159191.1
porin
WP_021159262.1
porin
WP_021159922.1
porin
WP_021160470.1
porin
WP_021160535.1
porin
WP_021160709.1
porin
WP_021161478.1
porin
WP_021162293.1
porin
WP_021162863.1
porin
WP_021163930.1
porin
WP_042975541.1
porin
WP_042976372.1
porin
WP_048021672.1
porin
WP_048021900.1
porin
WP_048025427.1
porin
WP_048027890.1
porin
WP_059488534.1
porin
WP_059488826.1
porin
WP_059553444.1
porin
WP_059589183.1
porin
WP_059589398.1
porin
WP_059621752.1
porin
WP_059675637.1
porin
WP_059677458.1
porin
WP_059707154.1
porin
WP_059709599.1
porin
WP_059814083.1
porin
WP_060048306.1
porin
WP_060048343.1
porin
WP_060048588.1
porin
WP_060049122.1
porin
WP_060049222.1
porin
WP_060049481.1
porin
WP_060049888.1
porin
WP_060050128.1
porin
WP_060050741.1
porin
WP_060050767.1
porin
WP_060051074.1
porin
WP_060051139.1
porin
WP_060051758.1
porin
WP_060052112.1
porin
WP_060052350.1
porin
WP_060088733.1
porin
WP_060088812.1
porin
WP_060088980.1
porin
WP_081062535.1
hypothetical protein
WP_081071500.1
porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
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contact.cube@univie.ac.at