Metamenu

Genomes encoding eukaryotic-like proteins

PF13810 Domain of unknown function (DUF4185)

Copy number in non-pathogens:
Mean=0.19 Stddev=0.71

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Nocardia africana NBRC 100379 s 6 5
Nocardia anaemiae NBRC 100462 s 6 5
Nocardia farcinica NBRC 15532 s 5 4
Nocardia yamanashiensis NBRC 100130 s 5 4
Nocardia elegans NBRC 108235 s 6 5
Nocardia mexicana NBRC 108244 s 9 7
Nocardia seriolae s 5 4
Nocardia seriolae s 5 4
Nocardia arthritidis NBRC 100137 s 6 5
Nocardia kruczakiae NBRC 101016 s 6 5
Nocardia mikamii NBRC 108933 s 6 5
Nocardia niwae NBRC 108934 = DSM 45340 s 6 5
Nocardia puris NBRC 108233 s 5 4
Nocardia vaccinii NBRC 15922 s 11 8
Nocardia vermiculata NBRC 100427 s 6 5
Mycobacterium novocastrense s 5 4
Nocardia asiatica NBRC 100129 s 6 5
Nocardia niigatensis NBRC 100131 s 5 4
Nocardia higoensis NBRC 100133 s 5 4
Nocardia araoensis NBRC 100135 s 6 5
Nocardia pneumoniae NBRC 100136 s 5 4
Nocardia veterana NBRC 100344 s 6 5
Nocardia paucivorans NBRC 100373 s 5 4
Nocardia abscessus NBRC 100374 s 6 5
Nocardia aobensis NBRC 100429 s 6 5
Nocardia concava NBRC 100430 s 5 4
Gordonia effusa NBRC 100432 s 6 5
Nocardia exalbida NBRC 100660 s 6 5
Nocardia transvalensis NBRC 15921 s 8 6
Rhodococcus jostii NBRC 16295 s 8 6
Nocardia farcinica IFM 10152 s 5 4
Mycobacterium mageritense DSM 44476 = CIP 104973 s 5 4
Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 s 6 5
Mycobacterium peregrinum s 5 4
Gordonia bronchialis DSM 43247 s 5 4
Mycobacterium hassiacum DSM 44199 s 5 4
Mycobacterium sp. JS623 s 5 4
Segniliparus rugosus ATCC BAA-974 s 5 4
Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 s 6 5
Mycobacterium phlei RIVM601174 s 5 4
Rhodococcus rhodnii LMG 5362 s 5 4
Mycobacterium hassiacum DSM 44199 s 5 4
Mycobacterium sp. UM_RHS s 5 4
Mycobacterium sp. UM_WWY s 6 5
Mycobacterium mageritense JR2009 s 5 4
Mycobacterium smegmatis str. MC2 155 s 6 5
Nocardia brasiliensis ATCC 700358 p 5 4
Nocardia nova SH22a s 6 5
Mycobacterium smegmatis str. MC2 155 s 6 5
Mycobacterium senegalense s 5 4
Mycobacterium senegalense s 5 4
Mycobacterium wolinskyi s 6 5
Mycobacterium confluentis s 8 6
Mycobacterium kubicae s 5 4
Mycobacterium peregrinum s 5 4
Mycobacterium wolinskyi s 6 5
Mycobacterium mucogenicum s 5 4
Mycobacterium mucogenicum s 5 4
Rhodococcus kunmingensis s 5 4
Mycobacterium mucogenicum s 5 4
Mycobacterium mucogenicum s 5 4
Mycobacterium peregrinum s 5 4
Mycobacterium peregrinum s 5 4
Mycobacterium peregrinum s 5 4
Nocardia seriolae s 5 4
Nocardia seriolae s 5 4
Rhodococcus triatomae s 5 4
Rhodococcus sp. WMMA185 s 5 4
Mycobacterium flavescens s 5 4
Mycobacterium triviale s 5 4
Mycobacterium porcinum s 6 5
Mycobacterium chelonae s 5 4
Mycobacterium chelonae s 5 4
Mycobacterium chelonae s 5 4
Mycobacterium branderi s 5 4
Mycobacterium insubricum s 5 4
Mycobacterium monacense DSM 44395 s 5 4
Mycobacterium porcinum s 6 5
Mycobacterium tusciae s 6 5
Mycobacterium porcinum s 6 5
Nocardia seriolae s 5 4
Mycobacterium peregrinum s 5 4
Mycobacterium smegmatis str. MC2 155 s 6 5

*p=pathogen;s=symbiont