Metamenu

Genomes encoding eukaryotic-like proteins

PF13459 4Fe-4S single cluster domain

Copy number in non-pathogens:
Mean=0.59 Stddev=1.68

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Mycobacterium kyorinense s 4 8
Streptomyces turgidiscabies s 4 8
Streptomyces acidiscabies s 4 8
Streptomyces acidiscabies s 4 8
Mycobacterium intracellulare M.i.198 s 6 12
Nocardia vaccinii NBRC 15922 s 9 16
Nocardia vermiculata NBRC 100427 s 4 8
Mycobacterium novocastrense s 6 12
Nocardia higoensis NBRC 100133 s 6 11
Nocardia abscessus NBRC 100374 s 4 8
Nocardia aobensis NBRC 100429 s 4 9
Nocardia exalbida NBRC 100660 s 4 8
Mycobacterium vaccae NBRC 14118 = CIP 105934 s 4 9
Mycobacterium cosmeticum s 4 9
Mycobacterium triplex s 6 12
Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 s 4 9
Mycobacterium peregrinum s 7 14
Mycobacterium chimaera s 6 11
Mycobacterium parascrofulaceum ATCC BAA-614 s 7 14
Mycobacterium avium subsp. paratuberculosis Pt139 s 4 8
Mycobacterium avium subsp. paratuberculosis Pt144 s 4 8
Mycobacterium avium subsp. paratuberculosis Pt145 s 4 8
Mycobacterium avium subsp. paratuberculosis Pt146 s 4 8
Mycobacterium avium subsp. paratuberculosis Pt154 s 4 8
Mycobacterium avium subsp. paratuberculosis Pt155 s 4 8
Mycobacterium avium subsp. paratuberculosis Pt164 s 4 8
Mycobacterium avium subsp. paratuberculosis CLIJ623 s 4 8
Mycobacterium avium subsp. paratuberculosis CLIJ644 s 4 8
Mycobacterium avium subsp. paratuberculosis CLIJ361 s 4 9
Mycobacterium colombiense CECT 3035 s 6 12
Mycobacterium chimaera s 6 11
Mycobacterium hassiacum DSM 44199 s 6 11
Frankia sp. CN3 s 5 10
Mycobacterium sp. JS623 s 5 10
Mycobacterium avium XTB13-223 s 4 9
Streptomyces turgidiscabies Car8 s 4 8
Mycobacterium avium subsp. paratuberculosis S5 s 4 8
Mycobacterium sp. 012931 s 4 8
Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 s 4 9
Mycobacterium xenopi RIVM700367 s 4 9
Mycobacterium vaccae ATCC 25954 s 4 9
Mycobacterium phlei RIVM601174 s 4 9
Mycobacterium intracellulare ATCC 13950 s 6 12
Mycobacterium avium subsp. avium ATCC 25291 s 4 9
Mycobacterium avium subsp. paratuberculosis 11-1786 s 4 9
Mycobacterium avium subsp. paratuberculosis 10-4404 s 4 8
Mycobacterium avium subsp. hominissuis 10-5606 s 6 11
Mycobacterium avium subsp. silvaticum ATCC 49884 s 4 9
Mycobacterium avium 10-5581 s 4 8
Mycobacterium avium subsp. paratuberculosis 10-5975 s 4 8
Mycobacterium avium subsp. avium 10-9275 s 4 9
Mycobacterium avium subsp. avium 11-4751 s 4 9
Mycobacterium avium subsp. paratuberculosis S397 s 4 9
Mycobacterium sp. H4Y s 4 9
Mycobacterium hassiacum DSM 44199 s 6 11
Mycobacterium sp. UM_RHS s 5 10
Mycobacterium mageritense JR2009 s 4 8
Mycobacterium avium subsp. avium DT 78 s 4 9
Mycobacterium avium subsp. paratuberculosis 1281 s 4 8
Mycobacterium avium subsp. paratuberculosis ATCC 19698 s 4 8
Mycobacterium avium subsp. paratuberculosis JTC 1285 s 4 8
Mycobacterium avium subsp. paratuberculosis 4B s 4 8
Mycobacterium avium subsp. paratuberculosis DT 3 s 4 8
Mycobacterium avium subsp. paratuberculosis JQ5 s 4 9
Mycobacterium intracellulare MOTT-02 s 6 12
Mycobacterium paraintracellulare s 5 10
Mycobacterium intracellulare ATCC 13950 s 6 11
Mycobacterium yongonense 05-1390 s 5 10
Mycobacterium smegmatis str. MC2 155 s 4 9
Mycobacterium kansasii ATCC 12478 s 4 9
Mycobacterium indicus pranii MTCC 9506 s 5 10
Mycobacterium sp. MOTT36Y s 4 9
Mycobacterium sinense s 4 8
Mycobacterium avium 104 s 6 12
Mycobacterium avium subsp. paratuberculosis K-10 s 4 8
Nocardia nova SH22a s 5 10
Mycobacterium avium MAV_061107_1842 s 4 9
Mycobacterium avium MAV_120709_2344 s 4 9
Mycobacterium avium MAV_120809_2495 s 4 9
Mycobacterium sp. MAC_011194_8550 s 4 9
Mycobacterium sp. MAC_080597_8934 s 4 9
Mycobacterium intracellulare MIN_052511_1280 s 6 11
Mycobacterium intracellulare MIN_061107_1834 s 8 15
Mycobacterium avium subsp. hominissuis A5 s 4 8
Mycobacterium avium subsp. hominissuis 3388 s 4 9
Mycobacterium avium subsp. hominissuis 100 s 4 9
Mycobacterium avium subsp. hominissuis 101 s 6 12
Mycobacterium kansasii s 4 9
Frankia sp. CpI1-S s 4 8
Frankia sp. CpI1-P s 4 8
Mycobacterium smegmatis str. MC2 155 s 4 9
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium senegalense s 4 9
Mycobacterium senegalense s 4 9
Mycobacterium heckeshornense s 6 11
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium chimaera s 5 10
Mycobacterium chimaera s 5 10
Mycobacterium chimaera s 6 11
Mycobacterium chimaera s 5 10
Mycobacterium wolinskyi s 4 9
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium gordonae s 4 8
Mycobacterium kyorinense s 4 8
Mycobacterium chimaera s 6 11
Mycobacterium confluentis s 6 12
Mycobacterium europaeum s 6 11
Mycobacterium florentinum s 7 13
Mycobacterium gastri s 4 9
Mycobacterium gordonae s 4 8
Mycobacterium kubicae s 4 9
Mycobacterium kyorinense s 4 8
Mycobacterium parmense s 6 11
Mycobacterium peregrinum s 7 14
Mycobacterium saskatchewanense s 7 14
Mycobacterium sherrisii s 4 9
Mycobacterium shimoidei s 4 8
Mycobacterium triplex s 6 12
Mycobacterium wolinskyi s 4 9
Mycobacterium xenopi s 6 11
Mycobacterium sp. UM_CSW s 5 10
Mycobacterium avium s 4 9
Mycobacterium yongonense s 5 10
Mycobacterium yongonense s 5 10
Mycobacterium chimaera s 6 11
Mycobacterium chimaera s 5 10
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium kansasii s 4 9
Mycobacterium kansasii s 4 9
Mycobacterium kansasii s 4 8
Mycobacterium kansasii s 4 8
Mycobacterium kansasii s 4 9
Mycobacterium kansasii s 4 8
Mycobacterium yongonense s 4 9
Mycobacterium gordonae s 4 9
Mycobacterium malmoense s 8 15
Mycobacterium malmoense s 7 13
Mycobacterium malmoense s 6 11
Mycobacterium malmoense s 6 12
Mycobacterium scrofulaceum s 4 8
Mycobacterium scrofulaceum s 4 9
Mycobacterium yongonense s 6 12
Mycobacterium peregrinum s 6 11
Mycobacterium peregrinum s 5 10
Mycobacterium peregrinum s 5 10
Streptomyces acidiscabies s 4 8
Streptomyces acidiscabies s 4 8
Mycobacterium gordonae s 4 8
Mycobacterium gordonae s 4 8
Mycobacterium malmoense s 7 13
Mycobacterium intermedium s 4 9
Mycobacterium holsaticum s 5 10
Mycobacterium flavescens s 7 13
Mycobacterium intermedium s 4 9
Mycobacterium sherrisii s 5 10
Mycobacterium shimoidei s 4 8
Mycobacterium porcinum s 6 11
Mycobacterium gordonae s 4 8
Mycobacterium chimaera s 6 11
Mycobacterium chimaera s 6 11
Mycobacterium malmoense s 4 8
Mycobacterium heckeshornense s 6 11
Mycobacterium algericum DSM 45454 s 4 8
Mycobacterium arosiense ATCC BAA-1401 = DSM 45069 s 5 10
Mycobacterium branderi s 4 9
Mycobacterium heidelbergense s 4 8
Mycobacterium insubricum s 4 9
Mycobacterium intermedium s 4 9
Mycobacterium malmoense s 4 8
Mycobacterium mantenii s 9 16
Mycobacterium monacense DSM 44395 s 8 15
Mycobacterium noviomagense s 4 9
Mycobacterium paraseoulense s 9 17
Mycobacterium porcinum s 7 13
Mycobacterium scrofulaceum s 7 13
Mycobacterium tusciae s 7 13
Mycobacterium chimaera s 6 11
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium porcinum s 4 8
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium kansasii s 4 9
Mycobacterium kansasii s 4 8
Mycobacterium kansasii s 4 9
Mycobacterium kansasii s 4 9
Mycobacterium kansasii s 4 9
Mycobacterium kansasii s 4 9
Mycobacterium kansasii s 4 9
Mycobacterium kansasii s 4 9
Mycobacterium simiae s 4 8
Mycobacterium paraintracellulare s 5 10
Mycobacterium peregrinum s 6 12
Mycobacterium colombiense CECT 3035 s 6 12
Mycobacterium avium subsp. paratuberculosis s 4 8
Mycobacterium smegmatis str. MC2 155 s 4 9

*p=pathogen;s=symbiont