Metamenu

Genomes encoding eukaryotic-like proteins

PF13412 Winged helix-turn-helix DNA-binding

Copy number in non-pathogens:
Mean=3.94 Stddev=3.60

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Rhizobium leguminosarum bv. trifolii WSM2297 s 5 24
Rhizobium rhizogenes NBRC 13257 s 5 23
Mesorhizobium loti MAFF303099 s 4 19
Rhizobium leguminosarum bv. viciae 3841 s 5 23
Sinorhizobium fredii HH103 s 4 19
Sinorhizobium meliloti Rm41 s 4 20
Rhizobium leguminosarum bv. trifolii WSM2304 s 5 25
Rhizobium leguminosarum bv. trifolii WSM1325 s 4 19
Rhizobium sp. AP16 s 4 20
Mesorhizobium opportunistum WSM2075 p 4 20
Rhizobium giardinii bv. giardinii H152 s 5 23
Rhizobium leguminosarum bv. trifolii SRDI565 s 4 20
Rhizobium leguminosarum bv. viciae 248 s 5 23
Mesorhizobium loti NZP2037 s 4 19
Ensifer sp. BR816 s 4 21
Rhizobium leguminosarum bv. viciae WSM1481 s 4 19
Rhizobium leguminosarum bv. trifolii SRDI943 s 4 19
Rhizobium leguminosarum bv. viciae WSM1455 s 4 19
Rhizobium leguminosarum bv. trifolii WSM597 s 5 24
Rhizobium leguminosarum bv. trifolii WSM2012 s 5 24
Rhizobium favelukesii s 4 20
Rhizobium mongolense USDA 1844 s 4 20
Sinorhizobium meliloti CIAM1775 s 4 19
Sinorhizobium meliloti AK58 s 4 20
Sinorhizobium meliloti MVII-I s 4 20
Rhizobium leguminosarum bv. viciae GB30 s 5 22
Rhizobium leguminosarum bv. viciae Vh3 s 4 21
Rhizobium leguminosarum bv. viciae Ps8 s 5 22
Rhizobium leguminosarum bv. trifolii TA1 s 4 21
Rhizobium leguminosarum bv. viciae Vc2 s 6 28
Mesorhizobium loti CJ3sym s 4 19
Rhizobium leucaenae USDA 9039 s 5 22
Rhizobium leguminosarum bv. viciae VF39 s 4 21
Rhizobium leguminosarum bv. viciae UPM1131 s 5 22
Rhizobium sullae WSM1592 s 4 21
Rhizobium leguminosarum bv. viciae UPM1137 s 4 20
Rhizobium leguminosarum bv. phaseoli FA23 s 4 21
Rhizobium sp. CCGE 510 s 4 20
Rhizobium etli CNPAF512 s 5 22
Rhizobium grahamii CCGE 502 s 4 19
Rhizobium sp. Kim5 s 6 26
Rhizobium sp. CIAT894 s 5 24
Sinorhizobium fredii CCBAU 45436 s 4 20
Shinella sp. DD12 s 5 24
Rhizobium freirei PRF 81 s 5 24
Sinorhizobium meliloti AE608H s 4 20
Rhizobium leguminosarum bv. trifolii CC278f s 4 21
Ensifer aridi s 5 22
Rhizobium leguminosarum bv. trifolii CC283b s 4 20
Mesorhizobium loti R88b s 4 20
Agrobacterium radiobacter K84 s 4 20
Rhizobium etli CFN 42 s 5 23
Rhizobium etli CIAT 652 s 4 21
Rhizobium tropici CIAT 899 s 5 23
Sinorhizobium fredii USDA 257 s 4 21
Agrobacterium rhizogenes s 5 22
Sinorhizobium sp. PC2 s 5 24
Rhizobium leguminosarum bv. trifolii WSM1689 s 5 22
Rhizobium leguminosarum bv. trifolii CB782 s 4 21
Agrobacterium rhizogenes s 4 21
Agrobacterium rhizogenes s 5 24
Rhizobium tropici s 4 20
Agrobacterium rhizogenes s 5 22
Rhizobium tropici s 5 22
Rhizobium tropici s 5 23
Agrobacterium rhizogenes s 4 20
Rhizobium tropici s 6 26
Agrobacterium rhizogenes s 4 21
Sinorhizobium meliloti s 4 19
Ensifer sp. ZNC0028 s 4 21
Rhizobium phaseoli s 5 25
Rhizobium phaseoli s 5 24
Rhizobium phaseoli s 5 23
Rhizobium phaseoli s 5 23
Rhizobium phaseoli s 5 23
Rhizobium phaseoli s 5 22
Rhizobium phaseoli s 5 23
Rhizobium phaseoli s 6 26
Rhizobium phaseoli s 5 24
Rhizobium phaseoli s 5 24
Rhizobium phaseoli s 6 26
Rhizobium phaseoli s 5 24
Rhizobium phaseoli s 5 24
Rhizobium sp. N113 s 5 22
Rhizobium sp. N1314 s 5 23
Rhizobium sp. N1341 s 5 22
Rhizobium sp. N621 s 5 22
Rhizobium sp. N6212 s 5 22
Rhizobium sp. N731 s 5 23
Rhizobium sp. N741 s 5 22
Rhizobium sp. N871 s 5 22
Rhizobium sp. N324 s 5 24
Rhizobium sp. N541 s 5 23
Rhizobium sp. N941 s 5 23
Rhizobium gallicum s 5 24
Sinorhizobium meliloti s 4 19
Sinorhizobium meliloti s 4 20
Sinorhizobium saheli s 5 22
Ensifer aridi s 4 20
Ensifer aridi s 5 22
Ensifer aridi s 5 22
Ensifer aridi s 5 23
Sinorhizobium sp. RAC02 s 4 19
Mesorhizobium sp. WSM1497 s 4 21
Mesorhizobium loti NZP2037 s 4 19
Ensifer shofinae s 4 21
Sinorhizobium meliloti s 4 19
Sinorhizobium meliloti s 4 19
Sinorhizobium meliloti s 4 20
Sinorhizobium meliloti s 4 20
Sinorhizobium meliloti s 4 19
Sinorhizobium meliloti s 4 20
Sinorhizobium meliloti 1021 s 4 19
Sinorhizobium fredii NGR234 s 5 25
Mesorhizobium ciceri biovar biserrulae WSM1271 s 4 19

*p=pathogen;s=symbiont