Metamenu

Genomes encoding eukaryotic-like proteins

PF12733 Cadherin-like beta sandwich domain

Copy number in non-pathogens:
Mean=0.12 Stddev=0.74

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Paenibacillus senegalensis JC66 s 5 4
Clostridium butyricum s 5 4
Paenibacillus riograndensis SBR5 s 5 4
Paenibacillus sp. JDR-2 s 7 6
Chthoniobacter flavus Ellin428 s 7 6
Paenibacillus sp. HGF5 s 5 4
Paenibacillus sp. HGF7 s 5 4
Clostridium saccharobutylicum DSM 13864 s 10 8
Clostridium butyricum 5521 s 13 10
Clostridium sp. D5 s 5 4
Lachnospiraceae bacterium 2_1_46FAA s 5 4
Paenibacillus sonchi X19-5 s 5 4
Clostridium butyricum DKU-01 s 13 10
Clostridium botulinum E1 str. 'BoNT E Beluga' s 9 7
Clostridium butyricum E4 str. BoNT E BL5262 s 13 10
Clostridium butyricum DSM 10702 s 13 10
Clostridium diolis DSM 15410 s 14 11
Paenibacillus vortex V453 s 6 5
Clostridium botulinum CB11/1-1 s 9 7
Paenibacillus sp. HGH0039 s 5 4
Clostridium butyricum 60E.3 s 13 10
Clostridium saccharobutylicum DSM 13864 s 10 8
Paenibacillus mucilaginosus 3016 s 6 5
Treponema primitia ZAS-2 s 10 8
Treponema azotonutricium ZAS-9 s 6 5
Clostridium botulinum E3 str. Alaska E43 s 9 7
[Clostridium] aerotolerans DSM 5434 s 5 4
[Clostridium] propionicum DSM 1682 s 5 4
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium butyricum s 13 10
Clostridium butyricum s 13 10
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium butyricum s 13 10
Clostridium butyricum s 13 10
Clostridium butyricum s 13 10
Paenibacillus glucanolyticus s 6 5
Paenibacillus glucanolyticus s 5 4
[Clostridium] propionicum DSM 1682 s 5 4
Clostridium butyricum s 13 10
Clostridium taeniosporum s 7 6
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus glucanolyticus s 6 5
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7
Clostridium botulinum s 9 7

*p=pathogen;s=symbiont