Metamenu

Genomes encoding eukaryotic-like proteins

PF12680 SnoaL-like domain

Copy number in non-pathogens:
Mean=3.27 Stddev=4.48

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Nocardia africana NBRC 100379 s 4 24
Nocardia anaemiae NBRC 100462 s 4 24
Nocardia yamanashiensis NBRC 100130 s 4 22
Nocardia elegans NBRC 108235 s 5 28
Nocardia mikamii NBRC 108933 s 4 23
Nocardia vaccinii NBRC 15922 s 5 30
Nocardia araoensis NBRC 100135 s 4 25
Nocardia veterana NBRC 100344 s 4 22
Nocardia abscessus NBRC 100374 s 4 24
Nocardia aobensis NBRC 100429 s 5 26
Nocardia concava NBRC 100430 s 5 29
Nocardia transvalensis NBRC 15921 s 4 22
Actinomadura chibensis NBRC 106107 s 4 25
Mycobacterium mageritense DSM 44476 = CIP 104973 s 4 22
Mycobacterium peregrinum s 4 25
Kutzneria sp. 744 s 4 25
Amycolatopsis orientalis DSM 46075 s 4 22
Frankia sp. CN3 s 4 22
Mycobacterium sp. JS623 s 5 30
Bradyrhizobium japonicum USDA 123 s 4 25
Bradyrhizobium sp. USDA 3384 s 4 22
Mycobacterium smegmatis str. MC2 155 s 4 23
Mycobacterium indicus pranii MTCC 9506 s 4 23
Nocardia brasiliensis ATCC 700358 p 4 23
Actinomadura madurae LIID-AJ290 s 5 27
Nocardia nova SH22a s 4 23
Actinoplanes subtropicus s 5 30
Pseudonocardia acaciae DSM 45401 s 8 43
Mycobacterium smegmatis str. MC2 155 s 4 23
Bradyrhizobium japonicum s 4 22
Mycobacterium gordonae s 4 23
Mycobacterium florentinum s 4 25
Mycobacterium peregrinum s 4 25
Mycobacterium wolinskyi s 4 24
Mycobacterium sp. UM_CSW s 5 26
Streptomyces scabiei s 4 22
Streptomyces europaeiscabiei s 4 22
Mycobacterium peregrinum s 4 22
Bradyrhizobium japonicum s 4 22
Mycobacterium porcinum s 4 23
Mycobacterium tusciae s 4 24
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 24
Bradyrhizobium canariense s 4 24
Bradyrhizobium canariense s 4 24
Bradyrhizobium canariense s 4 24
Bradyrhizobium japonicum s 4 25
Bradyrhizobium canariense s 4 24
Bradyrhizobium canariense s 4 23
Streptomyces rhizosphaericus s 5 26
Mycobacterium peregrinum s 4 22
Mycobacterium smegmatis str. MC2 155 s 4 24

*p=pathogen;s=symbiont