Genomes encoding eukaryotic-like proteins
PF08281 Sigma-70, region 4
Copy number in non-pathogens:
Mean=11.28 Stddev=12.44
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
Genome | Class* | ELD score | Number of proteins containing this domain |
---|---|---|---|
Bacteroides ovatus | s | 4 | 62 |
Odoribacter splanchnicus DSM 20712 | s | 4 | 69 |
Parabacteroides sp. ASF519 | s | 5 | 83 |
Butyricimonas synergistica DSM 23225 | s | 7 | 109 |
Actinopolymorpha alba DSM 45243 | s | 4 | 65 |
Parabacteroides gordonii DSM 23371 | s | 5 | 75 |
Dyadobacter beijingensis DSM 21582 | s | 4 | 67 |
Bacteroides sp. D2 | s | 4 | 67 |
Bacteroides ovatus CL03T12C18 | s | 4 | 63 |
Parabacteroides goldsteinii CL02T12C30 | s | 5 | 83 |
Sphingobacterium paucimobilis HER1398 | s | 5 | 81 |
Butyricimonas virosa DSM 23226 | s | 7 | 104 |
Dyadobacter fermentans DSM 18053 | s | 4 | 64 |
Actinomadura madurae LIID-AJ290 | s | 4 | 65 |
Actinoplanes subtropicus | s | 5 | 76 |
Parabacteroides sp. HGS0025 | s | 5 | 80 |
Parabacteroides gordonii MS-1 | s | 5 | 75 |
Parabacteroides goldsteinii DSM 19448 = WAL 12034 | s | 6 | 88 |
Asanoa hainanensis | s | 5 | 81 |
Amycolatopsis kentuckyensis | s | 4 | 69 |
Amycolatopsis pretoriensis | s | 4 | 73 |
Bacteroides ovatus | s | 4 | 65 |
Odoribacter splanchnicus | s | 5 | 77 |
Odoribacter splanchnicus | s | 5 | 77 |
*p=pathogen;s=symbiont