Metamenu

Genomes encoding eukaryotic-like proteins

PF07940 Heparinase II/III-like protein

Copy number in non-pathogens:
Mean=0.49 Stddev=1.10

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides gallinarum DSM 18171 = JCM 13658 s 4 6
Paenibacillus senegalensis JC66 s 7 9
Alistipes timonensis JC136 s 6 8
Alistipes senegalensis JC50 s 4 6
Bacteroides xylanisolvens SD CC 1b s 8 10
Bacteroides xylanisolvens SD CC 2a s 8 10
Bacteroides thetaiotaomicron s 4 6
Bacteroides thetaiotaomicron s 4 6
Bacteroides thetaiotaomicron s 4 5
Bacteroides thetaiotaomicron s 4 6
Bacteroides thetaiotaomicron s 4 6
Bacteroides ovatus s 9 11
Bacteroides thetaiotaomicron s 4 5
Bacteroides stercoris ATCC 43183 s 10 12
Bacteroides intestinalis DSM 17393 s 7 9
Bacteroides eggerthii DSM 20697 s 14 16
Bacteroides xylanisolvens SD CC 1b s 8 10
Bacteroides xylanisolvens SD CC 2a s 8 10
Bacteroides ovatus SD CMC 3f s 8 10
Bacteroides finegoldii DSM 17565 s 7 9
Bacteroides sp. 3_1_13 s 8 10
Bacteroides clarus YIT 12056 s 10 12
Bacteroides fluxus YIT 12057 s 4 6
Paenibacillus sp. HGF5 s 4 5
Bacteroides caccae ATCC 43185 s 4 5
Parabacteroides merdae ATCC 43184 s 4 5
Bacteroides ovatus ATCC 8483 s 8 10
Vibrio sp. HENC-03 s 4 5
Parabacteroides sp. ASF519 s 5 7
Didymococcus colitermitum TAV2 s 24 27
Bacteroides coprosuis DSM 18011 s 4 5
Cyclobacterium marinum DSM 745 s 6 8
Opitutaceae bacterium TAV1 s 39 44
Clostridium sp. KLE 1755 s 4 5
Bacteroides cellulosilyticus WH2 s 4 6
Runella zeae DSM 19591 s 4 5
Bacteroides gallinarum DSM 18171 = JCM 13658 s 11 13
Echinicola pacifica DSM 19836 s 7 9
Bacteroides sp. 1_1_6 s 4 5
Bacteroides sp. 2_2_4 s 8 10
Bacteroides sp. D1 s 8 10
Bacteroides sp. D2 s 9 11
Bacteroides sp. 2_1_22 s 8 10
Bacteroides sp. 3_1_23 s 9 11
Bacteroides ovatus 3_8_47FAA s 10 12
Bacteroides sp. D22 s 7 9
Bacteroides sp. 1_1_30 s 9 11
Bacteroides oleiciplenus YIT 12058 s 5 7
Bacteroides cellulosilyticus CL02T12C19 s 5 7
Bacteroides nordii CL02T12C05 s 6 8
Bacteroides ovatus CL02T12C04 s 9 11
Bacteroides ovatus CL03T12C18 s 10 12
Bacteroides xylanisolvens CL03T12C04 s 10 12
Parabacteroides goldsteinii CL02T12C30 s 6 8
Parabacteroides merdae CL03T12C32 s 4 5
Parabacteroides merdae CL09T00C40 s 4 5
Bacteroides faecis MAJ27 s 4 6
Bacteroides stercoris CC31F s 10 12
Bacteroides thetaiotaomicron s 4 6
Paenibacillus odorifer s 4 5
Janthinobacterium lividum s 4 5
Bacteroides thetaiotaomicron s 4 5
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 4 5
Bacteroides ovatus s 9 11
Bacteroides ovatus s 8 10
Bacteroides thetaiotaomicron s 4 5
Bacteroides caecimuris s 4 5
Bacteroides ovatus s 8 10
Bacteroides thetaiotaomicron s 4 5
Opitutaceae bacterium TSB47 s 5 7
Bacteroides xylanisolvens s 10 12
Bacteroides caecimuris s 4 5
Bacteroides ovatus s 11 13
Bacteroides ovatus s 11 13
Bacteroides xylanisolvens s 10 12
Alistipes timonensis JC136 s 6 8
Bacteroides ovatus s 8 10
Bacteroides clarus YIT 12056 s 10 12
Bacteroides faecis MAJ27 s 4 6
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Bacteroides thetaiotaomicron s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Bacteroides xylanisolvens s 11 13
Bacteroides xylanisolvens s 12 14
Bacteroides ovatus s 10 12
Bacteroides thetaiotaomicron VPI-5482 s 4 5

*p=pathogen;s=symbiont