Genomes encoding eukaryotic-like proteins
PF07366 SnoaL-like polyketide cyclase
Copy number in non-pathogens:
Mean=0.66 Stddev=1.23
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
Genome | Class* | ELD score | Number of proteins containing this domain |
---|---|---|---|
Nocardia yamanashiensis NBRC 100130 | s | 5 | 7 |
Nocardia mexicana NBRC 108244 | s | 4 | 6 |
Nocardia seriolae | s | 5 | 8 |
Nocardia seriolae | s | 5 | 8 |
Nocardia concava NBRC 100430 | s | 6 | 9 |
Nocardia tenerifensis NBRC 101015 | s | 5 | 7 |
Nocardia transvalensis NBRC 15921 | s | 4 | 6 |
Rhodococcus jostii NBRC 16295 | s | 4 | 6 |
Vibrio nigripulchritudo SO65 | s | 4 | 6 |
Vibrio nigripulchritudo AM115 | s | 4 | 6 |
Vibrio nigripulchritudo FTn2 | s | 4 | 6 |
Burkholderia sp. BT03 | s | 5 | 8 |
Amycolatopsis orientalis DSM 46075 | s | 4 | 6 |
Frankia sp. CN3 | s | 4 | 6 |
Mycobacterium sp. JS623 | s | 5 | 8 |
Bradyrhizobium sp. ARR65 | s | 4 | 6 |
Ruegeria conchae | s | 7 | 10 |
Paraburkholderia nodosa DSM 21604 | s | 4 | 6 |
Labrenzia sp. DG1229 | s | 5 | 8 |
Phaeobacter inhibens 2.10 | s | 4 | 6 |
Phaeobacter inhibens DSM 17395 | s | 4 | 6 |
Roseobacter litoralis Och 149 | s | 4 | 6 |
Pseudonocardia acaciae DSM 45401 | s | 7 | 10 |
Nocardia seriolae | s | 5 | 8 |
Nocardia seriolae | s | 5 | 8 |
Nocardia seriolae | s | 5 | 7 |
Burkholderia sp. BT03 | s | 5 | 8 |
Nocardia seriolae | s | 5 | 8 |
Streptomyces scabiei | s | 4 | 6 |
*p=pathogen;s=symbiont