Metamenu

Genomes encoding eukaryotic-like proteins

PF06863 Protein of unknown function (DUF1254)

Copy number in non-pathogens:
Mean=0.44 Stddev=1.24

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Vibrio campbellii s 4 6
Vibrio campbellii s 4 6
Vibrio campbellii s 5 7
Vibrio harveyi s 4 6
Vibrio owensii CAIM 1854 = LMG 25443 s 5 7
Achromobacter piechaudii NBRC 102461 s 4 6
Bradyrhizobium japonicum USDA 6 s 5 7
Rhizobium leguminosarum bv. viciae 3841 s 4 6
Sinorhizobium meliloti Rm41 s 4 6
Cupriavidus taiwanensis LMG 19424 s 4 6
Aliivibrio fischeri s 6 8
Rhizobium sullae s 8 11
Rhodococcus erythropolis SK121 s 4 6
Vibrio sp. HENC-03 s 5 7
Pseudomonas sp. GM21 s 6 8
Pseudomonas sp. GM33 s 7 10
Pseudomonas sp. GM49 s 5 7
Pseudomonas sp. GM74 s 7 10
Pseudomonas sp. GM78 s 5 7
Cupriavidus sp. UYPR2.512 s 5 7
Bradyrhizobium elkanii USDA 76 s 5 7
Cupriavidus metallidurans H1130 s 4 6
Sinorhizobium meliloti WSM4191 s 4 6
Sinorhizobium meliloti CIAM1775 s 5 7
Bradyrhizobium elkanii USDA 3259 s 6 8
Sinorhizobium meliloti BO21CC s 6 9
Sinorhizobium meliloti AK58 s 4 6
Bradyrhizobium japonicum USDA 38 s 6 9
Bradyrhizobium sp. Tv2a-2 s 6 9
Cupriavidus taiwanensis STM 6018 s 4 6
Sinorhizobium meliloti MVII-I s 4 6
Bradyrhizobium japonicum USDA 124 s 4 6
Bradyrhizobium japonicum USDA 6 s 5 7
Bradyrhizobium japonicum USDA 123 s 6 9
Bradyrhizobium elkanii USDA 3254 s 6 8
Rhizobium sullae WSM1592 s 4 6
Sinorhizobium meliloti RRl128 s 5 7
Rhizobium grahamii CCGE 502 s 6 8
Vibrio harveyi 1DA3 s 4 6
Mesorhizobium alhagi CCNWXJ12-2 s 4 6
Sinorhizobium meliloti CCNWSX0020 s 4 6
Vibrio fischeri SR5 s 5 7
Sinorhizobium meliloti AK75 s 4 6
Sinorhizobium meliloti A0641M s 4 6
Sinorhizobium meliloti 1A42 s 5 7
Sinorhizobium meliloti AE608H s 4 6
Sinorhizobium meliloti H1 s 5 7
Bradyrhizobium elkanii USDA 94 s 5 7
Paraburkholderia phytofirmans PsJN s 4 6
Sinorhizobium meliloti GR4 s 7 10
Vibrio fischeri MJ11 s 5 7
Bradyrhizobium japonicum s 5 7
Bradyrhizobium japonicum SEMIA 5079 s 7 10
Vibrio owensii CAIM 1854 = LMG 25443 s 5 7
Ensifer sp. ZNC0028 s 7 10
Bradyrhizobium japonicum s 7 10
Pseudomonas fluorescens s 8 11
Bradyrhizobium japonicum s 5 7
Vibrio harveyi s 4 6
Pseudomonas fluorescens s 4 6
Pseudomonas fluorescens s 4 6
Pseudomonas fluorescens s 7 10
Sinorhizobium meliloti s 4 6
Aliivibrio fischeri s 5 7
Vibrio splendidus s 6 8
Sinorhizobium meliloti s 4 6
Aliivibrio wodanis s 5 7
Aliivibrio wodanis s 5 7
Aliivibrio wodanis s 5 7
Aliivibrio wodanis s 5 7
Vibrio splendidus s 6 8
Vibrio splendidus s 6 8
Vibrio campbellii s 4 6
Aliivibrio fischeri s 4 6
Aliivibrio fischeri s 5 7
Aliivibrio fischeri s 4 6
Aliivibrio fischeri s 4 6
Aliivibrio fischeri s 4 6
Aliivibrio fischeri s 4 6
Mycobacterium mucogenicum s 5 7
Mycobacterium peregrinum s 4 6
Vibrio splendidus s 6 8
Vibrio splendidus s 5 7
Bradyrhizobium japonicum s 4 6
Flavobacterium johnsoniae s 4 6
Achromobacter xylosoxidans s 4 6
Achromobacter denitrificans s 4 6
Achromobacter xylosoxidans s 4 6
Bradyrhizobium japonicum s 4 6
Sinorhizobium meliloti s 5 7
Sinorhizobium meliloti s 4 6
Sinorhizobium meliloti s 4 6
Sinorhizobium meliloti s 5 7
Sinorhizobium meliloti s 5 7
Sinorhizobium meliloti s 5 7
Sinorhizobium meliloti s 6 9
Sinorhizobium meliloti 1021 s 6 8
Vibrio fischeri ES114 s 5 7

*p=pathogen;s=symbiont