Metamenu

Genomes encoding eukaryotic-like proteins

PF05875 Ceramidase

Copy number in non-pathogens:
Mean=0.05 Stddev=0.22

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Aurantimonas coralicida s 4 1
Herbaspirillum rubrisubalbicans NBRC 102523 s 4 1
Sinorhizobium fredii HH103 s 4 1
Mesorhizobium plurifarium s 4 1
Mesorhizobium plurifarium s 4 1
Mesorhizobium plurifarium s 4 1
Mesorhizobium plurifarium s 4 1
Azoarcus sp. BH72 s 4 1
Methylobacterium extorquens PA1 s 4 1
Methylobacterium populi BJ001 s 4 1
Methylobacterium nodulans ORS 2060 s 4 1
Methylobacterium radiotolerans JCM 2831 s 4 1
Methylobacterium sp. 4-46 s 4 1
Herbaspirillum sp. CF444 s 4 1
Frankia casuarinae s 4 1
Frankia sp. CcI6 s 4 1
Mesorhizobium opportunistum WSM2075 p 4 1
Pseudovibrio sp. FO-BEG1 s 8 2
Mesorhizobium loti NZP2037 s 4 1
Methylobacterium sp. WSM2598 s 4 1
Methylobacterium extorquens DSM 13060 s 4 1
Microvirga lotononidis s 4 1
Frankia sp. BMG5.23 s 4 1
Frankia sp. Allo2 s 4 1
Frankia sp. CeD s 4 1
Mesorhizobium sp. LNHC221B00 s 4 1
Stigmatella aurantiaca DW4/3-1 s 4 1
Rhodobacteraceae bacterium KLH11 s 4 1
Labrenzia alexandrii DFL-11 s 4 1
Pseudovibrio sp. JE062 s 8 2
Amorphus coralli DSM 19760 s 4 1
Marinobacterium rhizophilum DSM 18822 s 4 1
Mesorhizobium sp. WSM3224 s 4 1
Bradyrhizobium sp. Tv2a-2 s 4 1
Mesorhizobium ciceri CMG6 s 4 1
Mesorhizobium erdmanii USDA 3471 s 4 1
Bradyrhizobium sp. Ec3.3 s 4 1
Mesorhizobium loti CJ3sym s 4 1
Ferrimonas kyonanensis DSM 18153 s 4 1
Methylobacterium sp. 285MFTsu5.1 s 4 1
Pannonibacter phragmitetus DSM 14782 s 4 1
Herbaspirillum rubrisubalbicans Os34 s 4 1
Herbaspirillum sp. GW103 s 4 1
Ruegeria conchae s 4 1
Mesorhizobium ciceri ca181 s 4 1
Mesorhizobium alhagi CCNWXJ12-2 s 4 1
Methylobacterium sp. GXF4 s 4 1
Mesorhizobium amorphae CCNWGS0123 s 4 1
Herbaspirillum rubrisubalbicans Os45 s 4 1
Mesorhizobium ciceri WSM4083 s 4 1
Labrenzia sp. DG1229 s 4 1
Mesorhizobium loti R7A s 4 1
Mesorhizobium sp. WSM1293 s 4 1
Mesorhizobium sp. WSM2561 s 4 1
Mesorhizobium loti R88b s 4 1
Dinoroseobacter shibae DFL 12 = DSM 16493 s 4 1
Shewanella woodyi ATCC 51908 s 4 1
Roseobacter denitrificans OCh 114 s 4 1
Herbaspirillum seropedicae SmR1 s 4 1
Coxiella burnetii Dugway 5J108-111 s 4 1
Stigmatella aurantiaca DW4/3-1 s 4 1
Roseobacter litoralis Och 149 s 4 1
Coxiella burnetii RSA 331 s 4 1
Frankia sp. Thr s 4 1
Vibrio fortis s 4 1
Haematobacter missouriensis s 4 1
Haematobacter massiliensis s 4 1
Pseudonocardia acaciae DSM 45401 s 4 1
Mesorhizobium huakuii 7653R p 4 1
Colwellia psychrerythraea s 4 1
Martelella endophytica s 4 1
Herbaspirillum seropedicae s 4 1
Frankia sp. BR s 4 1
Microvirga vignae s 4 1
Herbaspirillum seropedicae s 4 1
Pannonibacter phragmitetus s 4 1
Pannonibacter phragmitetus s 4 1
Haematobacter massiliensis s 4 1
Haematobacter missouriensis s 4 1
Haematobacter missouriensis s 4 1
Haematobacter massiliensis s 4 1
Methylobacterium phyllosphaerae s 4 1
Mesorhizobium amorphae CCNWGS0123 s 4 1
Bosea sp. RAC05 s 4 1
Mesorhizobium sp. WSM1497 s 4 1
Mesorhizobium loti NZP2037 s 4 1
Roseobacter denitrificans OCh 114 s 4 1
Stigmatella aurantiaca s 4 1
Mesorhizobium ciceri biovar biserrulae WSM1271 s 4 1

*p=pathogen;s=symbiont