Genomes encoding eukaryotic-like proteins
PF05154 TM2 domain
Copy number in non-pathogens:
Mean=0.43 Stddev=0.66
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
| Genome | Class* | ELD score | Number of proteins containing this domain |
|---|---|---|---|
| Staphylococcus haemolyticus | s | 5 | 4 |
| Staphylococcus haemolyticus | s | 5 | 4 |
| Staphylococcus haemolyticus | s | 5 | 4 |
| Staphylococcus haemolyticus | s | 5 | 4 |
| Staphylococcus haemolyticus | s | 5 | 4 |
| Staphylococcus hominis | s | 5 | 4 |
| Campylobacter rectus RM3267 | s | 5 | 4 |
| Staphylococcus hominis SK119 | s | 6 | 5 |
| Brachyspira murdochii DSM 12563 | s | 5 | 4 |
| Corynebacterium matruchotii ATCC 33806 | s | 5 | 4 |
| Treponema succinifaciens DSM 2489 | s | 5 | 4 |
| Staphylococcus epidermidis NIHLM031 | s | 5 | 4 |
| Campylobacter showae CSUNSWCD | s | 5 | 4 |
| Saprospira grandis DSM 2844 | s | 5 | 4 |
| Staphylococcus hominis subsp. hominis C80 | s | 5 | 4 |
| Lachnospiraceae bacterium AB2028 | s | 6 | 5 |
| Fibrobacter intestinalis | s | 8 | 6 |
| Staphylococcus haemolyticus | s | 5 | 4 |
| Staphylococcus hominis | s | 5 | 4 |
| Citrobacter freundii | s | 6 | 5 |
| Enterobacter cloacae subsp. cloacae | s | 11 | 8 |
| Staphylococcus hominis | s | 5 | 4 |
| Nostoc sp. KVJ20 | s | 5 | 4 |
| Staphylococcus hominis | s | 5 | 4 |
| Staphylococcus haemolyticus | s | 5 | 4 |
| Staphylococcus hominis | s | 5 | 4 |
| Staphylococcus hominis | s | 6 | 5 |
*p=pathogen;s=symbiont
Release announcements
News
Latest publications
Contact
- +43 1 4277 76681
- +43 1 4277 876681
- contact.cube@univie.ac.at
