Genomes encoding eukaryotic-like proteins
PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Copy number in non-pathogens:
Mean=4.37 Stddev=3.20
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
| Genome | Class* | ELD score | Number of proteins containing this domain |
|---|---|---|---|
| Bradyrhizobium sp. STM 3843 | s | 4 | 18 |
| Amycolatopsis orientalis DSM 46075 | s | 4 | 18 |
| Bradyrhizobium sp. WSM3983 | s | 4 | 18 |
| Bradyrhizobium sp. ARR65 | s | 6 | 26 |
| Bradyrhizobium sp. Ec3.3 | s | 4 | 20 |
| Bradyrhizobium sp. Cp5.3 | s | 5 | 21 |
| Bradyrhizobium elkanii WSM2783 | s | 5 | 21 |
| Paraburkholderia xenovorans LB400 | s | 4 | 20 |
| Actinomadura madurae LIID-AJ290 | s | 4 | 18 |
| Amycolatopsis jejuensis | s | 6 | 26 |
| Pseudonocardia acaciae DSM 45401 | s | 8 | 31 |
| Paraburkholderia xenovorans LB400 | s | 4 | 20 |
| Bradyrhizobium canariense | s | 4 | 18 |
| Bradyrhizobium canariense | s | 4 | 18 |
| Bradyrhizobium canariense | s | 5 | 21 |
| Bradyrhizobium canariense | s | 5 | 21 |
| Bradyrhizobium japonicum | s | 5 | 21 |
| Bradyrhizobium canariense | s | 5 | 21 |
| Bradyrhizobium canariense | s | 5 | 21 |
| Bradyrhizobium canariense | s | 5 | 21 |
| Bradyrhizobium canariense | s | 5 | 21 |
| Amycolatopsis pretoriensis | s | 4 | 19 |
*p=pathogen;s=symbiont
Release announcements
News
Latest publications
Contact
- +43 1 4277 76681
- +43 1 4277 876681
- contact.cube@univie.ac.at
