Genomes encoding eukaryotic-like proteins
PF01844 HNH endonuclease
Copy number in non-pathogens:
Mean=1.44 Stddev=2.58
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
| Genome | Class* | ELD score | Number of proteins containing this domain |
|---|---|---|---|
| Nocardia concava NBRC 100430 | s | 4 | 14 |
| Corynebacterium minutissimum NBRC 15361 | s | 6 | 17 |
| Corynebacterium ihumii | s | 4 | 14 |
| Mycobacterium mucogenicum | s | 4 | 12 |
| Rhodococcus erythropolis SK121 | s | 6 | 18 |
| Kutzneria sp. 744 | s | 4 | 13 |
| Calothrix sp. PCC 7103 | s | 5 | 16 |
| Rhodococcus sp. P27 | s | 5 | 15 |
| Actinopolymorpha alba DSM 45243 | s | 7 | 22 |
| Rhodococcus rhodnii LMG 5362 | s | 8 | 24 |
| Corynebacterium aurimucosum ATCC 700975 | s | 6 | 17 |
| Corynebacterium falsenii DSM 44353 | s | 4 | 13 |
| Gordonia terrae | s | 4 | 13 |
| Corynebacterium ureicelerivorans | s | 4 | 12 |
| Myxosarcina sp. GI1 | s | 4 | 12 |
| Corynebacterium camporealensis | s | 6 | 17 |
| Corynebacterium minutissimum | s | 6 | 17 |
| Corynebacterium aurimucosum | s | 5 | 15 |
| Corynebacterium camporealensis | s | 6 | 18 |
| Corynebacterium minutissimum | s | 4 | 14 |
| Corynebacterium testudinoris | s | 4 | 13 |
| Rhodococcus hoagii | s | 4 | 12 |
| Mycobacterium mucogenicum | s | 4 | 12 |
| Gordonia terrae | s | 5 | 16 |
| Corynebacterium appendicis CIP 107643 | s | 7 | 20 |
| Plantibacter flavus | s | 6 | 18 |
*p=pathogen;s=symbiont
Release announcements
News
Latest publications
Contact
- +43 1 4277 76681
- +43 1 4277 876681
- contact.cube@univie.ac.at
