Genomes encoding eukaryotic-like proteins
PF01408 Oxidoreductase family, NAD-binding Rossmann fold
Copy number in non-pathogens:
Mean=6.41 Stddev=7.31
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
Genome | Class* | ELD score | Number of proteins containing this domain |
---|---|---|---|
Verrucomicrobium sp. BvORR034 | s | 5 | 45 |
Verrucomicrobium sp. BvORR106 | s | 5 | 44 |
Paenibacillus sp. JDR-2 | s | 5 | 44 |
Paenibacillus sp. HGF5 | s | 5 | 45 |
Rhizobium sp. CF142 | s | 4 | 36 |
Rhodopirellula baltica SWK14 | s | 4 | 41 |
Cyclobacterium marinum DSM 745 | s | 5 | 46 |
Rhizobium leguminosarum bv. trifolii WSM597 | s | 4 | 37 |
Actinopolymorpha alba DSM 45243 | s | 5 | 44 |
Rhizobium mongolense USDA 1844 | s | 4 | 37 |
Runella zeae DSM 19591 | s | 4 | 39 |
Dyadobacter beijingensis DSM 21582 | s | 4 | 42 |
Rhizobium leguminosarum bv. viciae UPM1131 | s | 4 | 37 |
Rhizobium etli CNPAF512 | s | 4 | 37 |
Rhizobium leguminosarum bv. trifolii CC278f | s | 4 | 38 |
Dyadobacter fermentans DSM 18053 | s | 4 | 41 |
Arenibacter algicola | s | 5 | 45 |
Agrobacterium rhizogenes | s | 4 | 38 |
Rhizobium gallicum | s | 4 | 36 |
Ruthenibacterium lactatiformans | s | 4 | 37 |
Paenibacillus glucanolyticus | s | 4 | 38 |
Opitutaceae bacterium TSB47 | s | 4 | 41 |
Paenibacillus glucanolyticus | s | 4 | 39 |
*p=pathogen;s=symbiont