Genomes encoding eukaryotic-like proteins
PF01230 HIT domain
Copy number in non-pathogens:
Mean=1.94 Stddev=0.97
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
| Genome | Class* | ELD score | Number of proteins containing this domain |
|---|---|---|---|
| Nocardia mexicana NBRC 108244 | s | 5 | 7 |
| Streptomyces turgidiscabies | s | 4 | 6 |
| Nocardia kruczakiae NBRC 101016 | s | 4 | 6 |
| Nocardia puris NBRC 108233 | s | 4 | 6 |
| Nocardia vaccinii NBRC 15922 | s | 5 | 7 |
| Nocardia thailandica NBRC 100428 | s | 4 | 6 |
| Nocardia tenerifensis NBRC 101015 | s | 4 | 6 |
| Gordonia aichiensis NBRC 108223 | s | 4 | 6 |
| Mycobacterium abscessus | s | 4 | 6 |
| Mycobacterium abscessus | s | 4 | 6 |
| Mycobacterium abscessus | s | 4 | 6 |
| Mycobacterium abscessus | s | 4 | 6 |
| Mycobacterium abscessus | s | 4 | 6 |
| Mycobacterium abscessus | s | 4 | 6 |
| Frankia sp. CN3 | s | 4 | 6 |
| Streptomyces turgidiscabies Car8 | s | 4 | 6 |
| Actinopolymorpha alba DSM 45243 | s | 11 | 13 |
| Salinispora arenicola CNX482 | s | 4 | 6 |
| Nocardia brasiliensis ATCC 700358 | p | 4 | 6 |
| Actinomadura madurae LIID-AJ290 | s | 6 | 8 |
| Nocardia nova SH22a | s | 5 | 7 |
| Micrococcus luteus | s | 4 | 6 |
| Mycobacterium abscessus | s | 4 | 6 |
| Mycobacterium abscessus | s | 4 | 6 |
| Lentzea kentuckyensis | s | 4 | 6 |
*p=pathogen;s=symbiont
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