Metamenu

Genomes encoding eukaryotic-like proteins

PF00848 Ring hydroxylating alpha subunit (catalytic domain)

Copy number in non-pathogens:
Mean=1.22 Stddev=2.47

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Mycobacterium intracellulare M.i.198 s 4 12
Mycobacterium novocastrense s 6 18
Rhodococcus jostii NBRC 16295 s 5 14
Mycobacterium triplex s 5 16
Mycobacterium chimaera s 7 20
Mycobacterium colombiense CECT 3035 s 4 12
Novosphingobium sp. AP12 s 4 13
Frankia sp. CN3 s 5 15
Mycobacterium sp. JS623 s 4 13
Frankia sp. Cc1.17 s 4 13
Mycobacterium avium XTB13-223 s 4 12
Frankia sp. EUN1f s 5 15
Mycobacterium intracellulare ATCC 13950 s 4 12
Sphingomonas wittichii DP58 s 9 25
Paraburkholderia nodosa DSM 21604 s 4 12
Frankia sp. EAN1pec s 5 16
Novosphingobium aromaticivorans DSM 12444 s 7 21
Paraburkholderia xenovorans LB400 s 7 19
Mycobacterium intracellulare MOTT-02 s 4 12
Mycobacterium intracellulare ATCC 13950 s 4 12
Mycobacterium avium 104 s 4 12
Mycobacterium intracellulare MIN_052511_1280 s 7 19
Mycobacterium intracellulare MIN_061107_1834 s 4 12
Mycobacterium avium subsp. hominissuis 101 s 4 12
Paraburkholderia xenovorans LB400 s 7 19
Novosphingobium malaysiense s 14 38
Mycobacterium chimaera s 7 20
Mycobacterium chimaera s 7 20
Mycobacterium chimaera s 4 12
Mycobacterium conspicuum s 4 12
Mycobacterium europaeum s 4 12
Mycobacterium florentinum s 5 14
Mycobacterium triplex s 5 16
Mycobacterium sp. UM_CSW s 4 12
Mycobacterium chimaera s 7 20
Mycobacterium chimaera s 4 12
Mycobacterium malmoense s 4 12
Mycobacterium malmoense s 4 13
Sphingobium sp. RAC03 s 4 13
Mycobacterium intermedium s 5 15
Mycobacterium flavescens s 6 18
Mycobacterium intermedium s 5 15
Mycobacterium chimaera s 7 20
Mycobacterium asiaticum DSM 44297 s 4 13
Mycobacterium intermedium s 5 15
Mycobacterium mantenii s 8 23
Mycobacterium monacense DSM 44395 s 6 17
Mycobacterium paraseoulense s 4 12
Mycobacterium scrofulaceum s 4 12
Mycobacterium tusciae s 6 18

*p=pathogen;s=symbiont