Genomes encoding eukaryotic-like proteins
PF00356 Bacterial regulatory proteins, lacI family
Copy number in non-pathogens:
Mean=8.67 Stddev=9.68
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
| Genome | Class* | ELD score | Number of proteins containing this domain |
|---|---|---|---|
| Streptomyces turgidiscabies | s | 5 | 60 |
| Streptomyces acidiscabies | s | 4 | 54 |
| Streptomyces acidiscabies | s | 4 | 52 |
| Didymococcus colitermitum TAV2 | s | 12 | 125 |
| Opitutaceae bacterium TAV1 | s | 15 | 157 |
| Rhizobium leguminosarum bv. viciae WSM1455 | s | 4 | 48 |
| Streptomyces turgidiscabies Car8 | s | 5 | 59 |
| Streptomyces ipomoeae 91-03 | s | 4 | 48 |
| Actinoplanes subtropicus | s | 5 | 60 |
| Bifidobacterium scardovii | s | 4 | 53 |
| Bifidobacterium scardovii | s | 5 | 58 |
| Streptomyces scabiei | s | 4 | 52 |
| Streptomyces sp. 96-12 | s | 4 | 51 |
| Opitutaceae bacterium TSB47 | s | 4 | 48 |
| Streptomyces acidiscabies | s | 4 | 50 |
| Streptomyces acidiscabies | s | 4 | 52 |
| Streptomyces scabiei | s | 4 | 51 |
*p=pathogen;s=symbiont
Release announcements
News
Latest publications
Contact
- +43 1 4277 76681
- +43 1 4277 876681
- contact.cube@univie.ac.at
