Genomes encoding eukaryotic-like proteins
PF00313 'Cold-shock' DNA-binding domain
Copy number in non-pathogens:
Mean=3.86 Stddev=2.52
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
Genome | Class* | ELD score | Number of proteins containing this domain |
---|---|---|---|
Bradyrhizobium diazoefficiens | s | 4 | 16 |
Bradyrhizobium japonicum USDA 38 | s | 4 | 15 |
Bradyrhizobium japonicum USDA 124 | s | 4 | 16 |
Bradyrhizobium japonicum USDA 122 | s | 4 | 14 |
Bradyrhizobium japonicum USDA 4 | s | 4 | 16 |
Bradyrhizobium japonicum USDA 123 | s | 4 | 16 |
Bradyrhizobium japonicum SEMIA 5079 | s | 4 | 15 |
Bradyrhizobium diazoefficiens SEMIA 5080 | s | 4 | 14 |
Bacillus megaterium | s | 4 | 15 |
Photobacterium kishitanii | s | 4 | 14 |
Photobacterium kishitanii | s | 4 | 14 |
Photobacterium kishitanii | s | 4 | 14 |
Photobacterium iliopiscarium | s | 4 | 14 |
Photobacterium kishitanii | s | 4 | 14 |
Photobacterium phosphoreum | s | 4 | 14 |
Bradyrhizobium japonicum | s | 4 | 14 |
Bacillus megaterium | s | 4 | 16 |
Bradyrhizobium diazoefficiens | s | 4 | 14 |
Photobacterium kishitanii | s | 5 | 18 |
Bacillus megaterium | s | 4 | 16 |
Photobacterium kishitanii | s | 4 | 16 |
Photobacterium kishitanii | s | 5 | 18 |
Bacillus megaterium | s | 6 | 20 |
Bradyrhizobium japonicum | s | 4 | 16 |
Bradyrhizobium elkanii | s | 4 | 14 |
Bradyrhizobium japonicum | s | 4 | 16 |
Bacillus megaterium | s | 5 | 17 |
*p=pathogen;s=symbiont