Metamenu

Genomes encoding eukaryotic-like proteins

PF00106 short chain dehydrogenase

Copy number in non-pathogens:
Mean=14.87 Stddev=13.99

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Nocardia africana NBRC 100379 s 4 73
Nocardia anaemiae NBRC 100462 s 4 80
Nocardia yamanashiensis NBRC 100130 s 4 80
Nocardia elegans NBRC 108235 s 4 80
Nocardia mexicana NBRC 108244 s 4 78
Mycobacterium kyorinense s 4 71
Mycobacterium intracellulare M.i.198 s 4 78
Nocardia inohanensis NBRC 100128 s 4 76
Nocardia kruczakiae NBRC 101016 s 4 75
Nocardia mikamii NBRC 108933 s 4 75
Nocardia vaccinii NBRC 15922 s 5 95
Mycobacterium novocastrense s 4 74
Nocardia niigatensis NBRC 100131 s 5 93
Nocardia abscessus NBRC 100374 s 4 78
Nocardia aobensis NBRC 100429 s 4 83
Nocardia concava NBRC 100430 s 4 84
Nocardia tenerifensis NBRC 101015 s 4 76
Nocardia transvalensis NBRC 15921 s 4 75
Rhodococcus jostii NBRC 16295 s 4 72
Mycobacterium cosmeticum s 4 74
Mycobacterium asiaticum DSM 44297 s 5 91
Mycobacterium triplex s 5 87
Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 s 4 80
Mycobacterium peregrinum s 4 76
Mycobacterium mucogenicum s 4 78
Mycobacterium chimaera s 4 79
Mycobacterium parascrofulaceum ATCC BAA-614 s 4 78
Mycobacterium colombiense CECT 3035 s 5 85
Mycobacterium chimaera s 4 81
Frankia sp. CN3 s 5 88
Mycobacterium sp. JS623 s 4 75
Frankia sp. EUN1f s 4 74
Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 s 4 80
Mycobacterium intracellulare ATCC 13950 s 4 79
Mycobacterium sp. H4Y s 4 74
Mycobacterium sp. UM_RHS s 4 81
Mycobacterium mageritense JR2009 s 4 74
Mycobacterium intracellulare MOTT-02 s 4 80
Mycobacterium paraintracellulare s 4 82
Mycobacterium intracellulare ATCC 13950 s 4 83
Mycobacterium yongonense 05-1390 s 4 77
Mycobacterium smegmatis str. MC2 155 s 4 73
Mycobacterium indicus pranii MTCC 9506 s 4 83
Mycobacterium sp. MOTT36Y s 4 82
Nocardia brasiliensis ATCC 700358 p 4 77
Mycobacterium avium 104 s 4 76
Nocardia nova SH22a s 5 92
Mycobacterium intracellulare MIN_052511_1280 s 4 80
Mycobacterium intracellulare MIN_061107_1834 s 5 87
Mycobacterium avium subsp. hominissuis 100 s 4 72
Mycobacterium avium subsp. hominissuis 101 s 4 78
Mycobacterium smegmatis str. MC2 155 s 4 73
Mycobacterium senegalense s 4 72
Mycobacterium senegalense s 4 72
Mycobacterium chimaera s 4 81
Mycobacterium chimaera s 4 80
Mycobacterium chimaera s 4 81
Mycobacterium chimaera s 4 77
Mycobacterium wolinskyi s 4 74
Mycobacterium gordonae s 4 78
Mycobacterium kyorinense s 4 74
Mycobacterium chimaera s 4 81
Mycobacterium conspicuum s 4 84
Mycobacterium europaeum s 4 73
Mycobacterium florentinum s 4 83
Mycobacterium gordonae s 4 84
Mycobacterium kubicae s 4 71
Mycobacterium kyorinense s 4 72
Mycobacterium parmense s 4 78
Mycobacterium peregrinum s 4 76
Mycobacterium saskatchewanense s 4 71
Mycobacterium triplex s 5 87
Mycobacterium wolinskyi s 4 79
Mycobacterium sp. UM_CSW s 5 88
Mycobacterium yongonense s 4 77
Mycobacterium yongonense s 4 77
Mycobacterium chimaera s 4 80
Mycobacterium chimaera s 4 80
Mycobacterium mucogenicum s 4 73
Mycobacterium yongonense s 4 78
Mycobacterium gordonae s 4 80
Mycobacterium malmoense s 4 75
Mycobacterium malmoense s 4 78
Mycobacterium malmoense s 4 75
Mycobacterium malmoense s 4 74
Mycobacterium scrofulaceum s 4 72
Mycobacterium yongonense s 4 82
Mycobacterium peregrinum s 4 77
Mycobacterium peregrinum s 4 78
Mycobacterium peregrinum s 4 75
Mycobacterium gordonae s 4 80
Mycobacterium gordonae s 5 88
Mycobacterium malmoense s 4 73
Mycobacterium intermedium s 4 79
Mycobacterium flavescens s 4 71
Mycobacterium intermedium s 4 80
Mycobacterium porcinum s 4 77
Mycobacterium gordonae s 4 83
Mycobacterium chimaera s 4 81
Mycobacterium chelonae s 4 76
Mycobacterium chelonae s 4 76
Mycobacterium chelonae s 4 71
Mycobacterium chelonae s 4 71
Mycobacterium chimaera s 4 81
Mycobacterium arosiense ATCC BAA-1401 = DSM 45069 s 4 80
Mycobacterium asiaticum DSM 44297 s 5 91
Mycobacterium branderi s 4 83
Mycobacterium intermedium s 4 80
Mycobacterium mantenii s 4 74
Mycobacterium monacense DSM 44395 s 4 73
Mycobacterium paraseoulense s 5 94
Mycobacterium porcinum s 5 92
Mycobacterium scrofulaceum s 4 82
Mycobacterium tusciae s 4 75
Mycobacterium chimaera s 4 80
Mycobacterium porcinum s 4 75
Mycobacterium simiae s 4 73
Mycobacterium paraintracellulare s 4 82
Mycobacterium colombiense CECT 3035 s 4 84
Mycobacterium smegmatis str. MC2 155 s 4 73

*p=pathogen;s=symbiont