Effective results for gamma proteobacterium IMCC3088 (eggnog40)
Summary
Number of putative secreted proteins: 26
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 11 eukaryotic-like domains, contained in 26 proteins (2 high, 24 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
---|---|---|---|---|---|
876044.IMCC3088_260 | (PF13469) | ER | |||
876044.IMCC3088_466 | (PF14336) | (ER) | |||
876044.IMCC3088_1066 | (PF05019) | (mitochondrial) | |||
876044.IMCC3088_1824 | (PF14863) | ER | |||
876044.IMCC3088_2738 | (PF02544) | ER | |||
876044.IMCC3088_1963 | (PF01509) | (mitochondrial) | |||
876044.IMCC3088_890 | (PF14863) | ER; (ER) | |||
876044.IMCC3088_1913 | (PF13469) | (mitochondrial) | |||
876044.IMCC3088_2104 | (PF13469) | (plastid) | |||
876044.IMCC3088_2105 | (PF06258) | (mitochondrial) | |||
876044.IMCC3088_1512 | PF00410 | (ER) | |||
876044.IMCC3088_462 | (PF11815) | ||||
876044.IMCC3088_1859 | (PF16565) | ||||
876044.IMCC3088_2102 | (PF06258) | ||||
876044.IMCC3088_87 | (PF13469) | ||||
876044.IMCC3088_944 | PF00410 | not used | |||
876044.IMCC3088_790 | (PF02958) | ||||
876044.IMCC3088_1496 | (PF02958) | ||||
876044.IMCC3088_1495 | (PF13469) | ||||
876044.IMCC3088_1019 | (PF13469) | ||||
876044.IMCC3088_132 | (PF13469) | ||||
876044.IMCC3088_61 | (PF14863) | ||||
876044.IMCC3088_1962 | (PF01509) | ||||
876044.IMCC3088_1467 | (PF13469) | ||||
876044.IMCC3088_2215 | (PF13469) | ||||
876044.IMCC3088_242 | (PF05019) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)