Metamenu

Effective results for Actinomyces sp. oral taxon 170 str. F0386 (eggnog40)

Summary

Number of putative secreted proteins: 10
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 6 eukaryotic-like domains, contained in 10 proteins (0 high, 10 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
762963.HMPREF9056_02665(PF13367)ER
762963.HMPREF9056_02410(PF09359)(plastid)
762963.HMPREF9056_00099(PF04218)(mitochondrial)
762963.HMPREF9056_01474(PF09818)
762963.HMPREF9056_01247(PF13367)
762963.HMPREF9056_01990(PF08354)
762963.HMPREF9056_02400(PF13367)
762963.HMPREF9056_02971(PF14885)
762963.HMPREF9056_02413(PF09359)
762963.HMPREF9056_02919(PF09818)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================