Effective results for Komagataeibacter hansenii ATCC 23769 (eggnog40)

Summary

Number of putative secreted proteins: 23
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 7 eukaryotic-like domains, contained in 23 proteins (1 high, 22 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
714995.GXY_14133(PF02082)mitochondrial
714995.GXY_13828(PF03022)ER
714995.GXY_03148(PF13391)(mitochondrial)
714995.GXY_08220(PF02082)(mitochondrial)
714995.GXY_04257(PF02082)(ER)
714995.GXY_06940(PF02082)ER; (ER)
714995.GXY_13408(PF03022)ER
714995.GXY_12133(PF02082)(ER)
714995.GXY_16673(PF02082)plastid
714995.GXY_15222(PF02082)(ER)
714995.GXY_04931(PF03022)
714995.GXY_07455(PF08856)
714995.GXY_07840(PF08883)
714995.GXY_16252(PF03022)
714995.GXY_13823(PF02082)
714995.GXY_02768(PF08856)
714995.GXY_07400(PF02082)
714995.GXY_06545(PF08883)
714995.GXY_04394(PF12513)
714995.GXY_11713(PF13391)
714995.GXY_03133(PF13391)
714995.GXY_14285(PF02082)
714995.GXY_09684PF04572

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================