Effective results for Bacillus cellulosilyticus DSM 2522 (eggnog40)

Summary

Number of putative secreted proteins: 38
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 16 eukaryotic-like domains, contained in 38 proteins (3 high, 35 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
649639.Bcell_3504				(PF02055) (PF17189)	ER
649639.Bcell_1280				(PF02018) PF03639	ER
649639.Bcell_1304				(PF04519)	ER
649639.Bcell_0541				(PF02018)	ER
649639.Bcell_3787				(PF03714)	ER
649639.Bcell_3788				(PF03714)	ER
649639.Bcell_2237				(PF03851)	mitochondrial
649639.Bcell_0683				(PF02018)	ER
649639.Bcell_0782				(PF06695)	ER
649639.Bcell_0690				(PF02018)	ER
649639.Bcell_3455				(PF00344)	mitochondrial
649639.Bcell_4185				PF03639	ER
649639.Bcell_0524				(PF02018)	ER
649639.Bcell_0523				(PF00079)	ER
649639.Bcell_0476				(PF02681)	ER
649639.Bcell_3398				(PF02681)	ER
649639.Bcell_3802				(PF16472)	ER
649639.Bcell_3729				PF03639	ER
649639.Bcell_4034				(PF16472)	ER
649639.Bcell_0821				(PF02055) (PF17189)
649639.Bcell_2789				(PF03059)	(mitochondrial)
649639.Bcell_0689				(PF02055) (PF17189)
649639.Bcell_3505				(PF02055) (PF17189)
649639.Bcell_4014				(PF13518)
649639.Bcell_2361				(PF04519)
649639.Bcell_0814				(PF06695)
649639.Bcell_0142				(PF00344)
649639.Bcell_2056				(PF04519)
649639.Bcell_1026				(PF13518)
649639.Bcell_3999				(PF13518)
649639.Bcell_3873				(PF13518)
649639.Bcell_3264				(PF05495)
649639.Bcell_3468				(PF04519)
649639.Bcell_1249				(PF13518)
649639.Bcell_3390				(PF00079)
649639.Bcell_3832				(PF13518)
649639.Bcell_1077				(PF12638)
649639.Bcell_1997				(PF03851)

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================