Metamenu

Effective results for Dialister invisus DSM 15470 (eggnog40)

Summary

Number of putative secreted proteins: 17
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 10 eukaryotic-like domains, contained in 17 proteins (4 high, 13 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
592028.GCWU000321_01662(PF07787)ER
592028.GCWU000321_00630(PF01969)(mitochondrial)
592028.GCWU000321_01623(PF13207)(mitochondrial)
592028.GCWU000321_01449(PF09991)(ER)
592028.GCWU000321_00639(PF02873)
592028.GCWU000321_00238PF10551
592028.GCWU000321_01633PF07894not used
592028.GCWU000321_00451(PF03652)
592028.GCWU000321_01749(PF09991)
592028.GCWU000321_00648(PF03652)
592028.GCWU000321_00354(PF02873)
592028.GCWU000321_01171PF10551
592028.GCWU000321_01579(PF03083)
592028.GCWU000321_01060PF10551
592028.GCWU000321_02017(PF03083)
592028.GCWU000321_01070(PF01969)
592028.GCWU000321_01650(PF14566)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================