Effective results for Catonella morbi ATCC 51271 (eggnog40)

Summary

Number of putative secreted proteins: 29
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 6 eukaryotic-like domains, contained in 29 proteins (1 high, 28 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
592026.GCWU000282_00064				(PF09359)	(mitochondrial)
592026.GCWU000282_00559				(PF03644)	(ER)
592026.GCWU000282_01731				PF02916	ER
592026.GCWU000282_00931				(PF00872)
592026.GCWU000282_01156				(PF00872)
592026.GCWU000282_01403				(PF04991)
592026.GCWU000282_01140				(PF00872)
592026.GCWU000282_01551				(PF09359)
592026.GCWU000282_00381				(PF00872)	not used
592026.GCWU000282_00986				(PF00872)	not used
592026.GCWU000282_00985				(PF00872)
592026.GCWU000282_01562				(PF00872)
592026.GCWU000282_01563				(PF00872)
592026.GCWU000282_01561				(PF00872)	not used
592026.GCWU000282_01740				(PF04991)
592026.GCWU000282_00776				(PF00872)	not used
592026.GCWU000282_01910				(PF16387)
592026.GCWU000282_01135				(PF00872)	not used
592026.GCWU000282_01137				(PF00872)
592026.GCWU000282_01136				(PF00872)
592026.GCWU000282_01131				(PF00872)	not used
592026.GCWU000282_01130				(PF00872)
592026.GCWU000282_01139				(PF00872)	not used
592026.GCWU000282_01138				(PF00872)	not used
592026.GCWU000282_01746				(PF00872)
592026.GCWU000282_00021				(PF04991)
592026.GCWU000282_01180				(PF00872)	not used
592026.GCWU000282_00262				(PF00872)
592026.GCWU000282_01722				(PF00872)

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================