Metamenu

Effective results for Peptoniphilus sp. oral taxon 386 str. F0131 (eggnog40)

Summary

Number of putative secreted proteins: 37
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 19 eukaryotic-like domains, contained in 37 proteins (2 high, 35 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
575609.HMPREF0629_00827(PF03577)ER
575609.HMPREF0629_00073(PF11070)ER
575609.HMPREF0629_00467(PF00112)ER
575609.HMPREF0629_00253(PF01813)mitochondrial
575609.HMPREF0629_00232(PF01813)mitochondrial; (mitochondrial)
575609.HMPREF0629_01359(PF16199)(mitochondrial)
575609.HMPREF0629_00976(PF16199)(mitochondrial)
575609.HMPREF0629_01342(PF07837) (PF02971)
575609.HMPREF0629_00168(PF07837) (PF02971)
575609.HMPREF0629_00803PF00380not used
575609.HMPREF0629_00802PF00380
575609.HMPREF0629_00387(PF03577)
575609.HMPREF0629_00638(PF00882)
575609.HMPREF0629_00238(PF01496)
575609.HMPREF0629_00239(PF01992)
575609.HMPREF0629_01158(PF03577)
575609.HMPREF0629_00543(PF12646)
575609.HMPREF0629_01003(PF16199)
575609.HMPREF0629_00260(PF01496)
575609.HMPREF0629_00987(PF03577)
575609.HMPREF0629_00815(PF01795)
575609.HMPREF0629_00878(PF00882)
575609.HMPREF0629_00258(PF01991)
575609.HMPREF0629_00256(PF01990)
575609.HMPREF0629_00257(PF01992)
575609.HMPREF0629_00255(PF16886)
575609.HMPREF0629_00252(PF01813)
575609.HMPREF0629_01075(PF02410)
575609.HMPREF0629_01074(PF02410)
575609.HMPREF0629_00234(PF16886)
575609.HMPREF0629_00236(PF01990)
575609.HMPREF0629_00816(PF01795)
575609.HMPREF0629_00365(PF01765)
575609.HMPREF0629_00754(PF00112)
575609.HMPREF0629_01345(PF04961)
575609.HMPREF0629_00908(PF01765)
575609.HMPREF0629_00166(PF04961)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================