Effective results for Bacteroidetes oral taxon 274 str. F0058 (eggnog40)

Summary

Number of putative secreted proteins: 36
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 18 eukaryotic-like domains, contained in 36 proteins (1 high, 35 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
575590.HMPREF0156_00333(PF02368)(mitochondrial)
575590.HMPREF0156_00585(PF02368)ER
575590.HMPREF0156_01403(PF13936)(mitochondrial)
575590.HMPREF0156_00812(PF02368)ER
575590.HMPREF0156_00813(PF02368)ER
575590.HMPREF0156_00920(PF03083)ER
575590.HMPREF0156_00252(PF01715)(mitochondrial)
575590.HMPREF0156_00265(PF14771)ER
575590.HMPREF0156_01648(PF02368)ER
575590.HMPREF0156_01254(PF16314)mitochondrial; (mitochondrial)
575590.HMPREF0156_01875(PF13936)(mitochondrial)
575590.HMPREF0156_01475(PF03577)ER
575590.HMPREF0156_00613(PF02368)ER
575590.HMPREF0156_00997(PF05693)mitochondrial
575590.HMPREF0156_00720(PF02368)ER
575590.HMPREF0156_00894(PF15588)mitochondrial; (mitochondrial)
575590.HMPREF0156_00710(PF03083)(ER)
575590.HMPREF0156_01541(PF02368)ER
575590.HMPREF0156_01364(PF02368)ER
575590.HMPREF0156_01363(PF02368)ER
575590.HMPREF0156_01362(PF02368)ER
575590.HMPREF0156_01554(PF00431)ER
575590.HMPREF0156_00598(PF03577)(plastid)
575590.HMPREF0156_01232(PF05034) (PF07476)
575590.HMPREF0156_00065(PF13936)(mitochondrial)
575590.HMPREF0156_01247(PF02971) (PF07837)
575590.HMPREF0156_01230(PF14330)
575590.HMPREF0156_00276(PF13936)
575590.HMPREF0156_01310(PF13936)
575590.HMPREF0156_01876(PF13936)
575590.HMPREF0156_01052(PF01715)
575590.HMPREF0156_00425(PF13936)
575590.HMPREF0156_00886(PF05704)
575590.HMPREF0156_00431(PF03577)
575590.HMPREF0156_00948(PF01094)
575590.HMPREF0156_00973PF16269

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================