Effective results for Enterococcus casseliflavus EC20 (eggnog40)

Summary

Number of putative secreted proteins: 135
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 29 eukaryotic-like domains, contained in 135 proteins (2 high, 133 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
565655.ECBG_00034(PF01074) (PF09261) (PF07748)(mitochondrial)
565655.ECBG_01789(PF01813)(mitochondrial)
565655.ECBG_00439(PF01813)(mitochondrial)
565655.ECBG_00435(PF01992)(mitochondrial)
565655.ECBG_02777(PF05738)(ER)
565655.ECBG_02785(PF00137)ER; (ER)
565655.ECBG_01949(PF05738)ER
565655.ECBG_01948(PF05738)ER
565655.ECBG_00406(PF13529)ER
565655.ECBG_00268(PF01074) (PF07748) (PF09261)
565655.ECBG_00126(PF01074) (PF09261) (PF07748)
565655.ECBG_03010(PF05738)ER
565655.ECBG_02465(PF05738)ER
565655.ECBG_02345(PF00367)ER
565655.ECBG_00259(PF00359)(mitochondrial)
565655.ECBG_02720(PF00359)(mitochondrial)
565655.ECBG_01660(PF00367)(ER)
565655.ECBG_02250(PF00359)ER
565655.ECBG_00381(PF01074) (PF09261) (PF07748)
565655.ECBG_01653(PF01418)mitochondrial
565655.ECBG_02707(PF13529)(ER)
565655.ECBG_00514(PF05738)(mitochondrial)
565655.ECBG_00190(PF14249)(mitochondrial)
565655.ECBG_02444(PF01074) (PF07748) (PF09261)
565655.ECBG_01583(PF03644)ER
565655.ECBG_00563(PF00139)ER
565655.ECBG_02633(PF00359)(mitochondrial)
565655.ECBG_00178(PF01418)(mitochondrial)
565655.ECBG_01213(PF00232)(ER)
565655.ECBG_00437(PF02874) (PF16886)
565655.ECBG_01649(PF16875) (PF16874)
565655.ECBG_00456(PF16875) (PF16874)
565655.ECBG_01787(PF02874) (PF16886)
565655.ECBG_01786(PF01990)(mitochondrial)
565655.ECBG_03135(PF00359)(mitochondrial)
565655.ECBG_00508PF15886(mitochondrial)
565655.ECBG_02446(PF00232)(mitochondrial)
565655.ECBG_00361(PF16875) (PF16874)
565655.ECBG_00179(PF00367)
565655.ECBG_01685(PF00232)
565655.ECBG_01688(PF01418)
565655.ECBG_00555(PF00232)
565655.ECBG_00554(PF00367)
565655.ECBG_00228(PF02629)
565655.ECBG_02156(PF00689)
565655.ECBG_02960(PF00359)
565655.ECBG_01211(PF01418)
565655.ECBG_00162(PF00232)
565655.ECBG_01788(PF02874)
565655.ECBG_01783(PF00137)
565655.ECBG_00438(PF02874)
565655.ECBG_00432(PF01496)
565655.ECBG_00433(PF00137)
565655.ECBG_00436(PF01990)
565655.ECBG_01207(PF00232)
565655.ECBG_02959(PF00359)
565655.ECBG_00151(PF00232)
565655.ECBG_00150(PF00232)
565655.ECBG_00121(PF06042)
565655.ECBG_00330(PF00367)
565655.ECBG_00449(PF00367)
565655.ECBG_02790(PF02874)
565655.ECBG_00937(PF01418)
565655.ECBG_00841(PF00359)
565655.ECBG_01304(PF01418)
565655.ECBG_01302(PF00232)
565655.ECBG_00148(PF01418)
565655.ECBG_02567(PF00232)
565655.ECBG_00320(PF00359)
565655.ECBG_02788(PF02874)
565655.ECBG_00450(PF00232)
565655.ECBG_00216(PF02629)
565655.ECBG_01533(PF13529)
565655.ECBG_00599(PF00232)
565655.ECBG_00598(PF00367)
565655.ECBG_00260(PF00359)
565655.ECBG_00467(PF00689)
565655.ECBG_02367(PF00359)
565655.ECBG_02368(PF00359)
565655.ECBG_02962(PF00359)
565655.ECBG_00122(PF00359)
565655.ECBG_00123(PF00359)
565655.ECBG_00699(PF00232)
565655.ECBG_00696(PF00367)
565655.ECBG_00697(PF01418)
565655.ECBG_00580(PF00232)
565655.ECBG_03104(PF00689)
565655.ECBG_01193(PF00367)
565655.ECBG_01513(PF00367)
565655.ECBG_02515(PF00359)
565655.ECBG_02512(PF00359)
565655.ECBG_00488(PF02629)
565655.ECBG_03119(PF00367)
565655.ECBG_02340(PF00367)
565655.ECBG_02343(PF01418)
565655.ECBG_01291(PF00232)
565655.ECBG_01295(PF00232)
565655.ECBG_01782(PF01496)
565655.ECBG_01785(PF01992)
565655.ECBG_01784(PF01991)
565655.ECBG_00075(PF00367)
565655.ECBG_02509(PF01418)
565655.ECBG_02659(PF00367)
565655.ECBG_02249(PF00359)
565655.ECBG_02083(PF01418)
565655.ECBG_02086(PF00367)
565655.ECBG_01448(PF06042)
565655.ECBG_01668(PF00367)
565655.ECBG_02710(PF02629)
565655.ECBG_02090(PF01418)
565655.ECBG_00383(PF00232)
565655.ECBG_00380(PF06824)
565655.ECBG_02522(PF00359)
565655.ECBG_01652(PF00232)
565655.ECBG_01654(PF00367)
565655.ECBG_02415(PF00689)
565655.ECBG_00021(PF02629)
565655.ECBG_02607(PF00232)
565655.ECBG_00343(PF00367)
565655.ECBG_00612(PF00689)
565655.ECBG_02911(PF00232)
565655.ECBG_01249(PF02874)
565655.ECBG_03089(PF13127)
565655.ECBG_00579(PF01418)
565655.ECBG_00578(PF01418)
565655.ECBG_02447(PF01418)
565655.ECBG_00370(PF00689)
565655.ECBG_03064(PF00232)
565655.ECBG_00180(PF00232)
565655.ECBG_00181(PF00232)
565655.ECBG_01692(PF00359)
565655.ECBG_02450(PF00232)
565655.ECBG_01831PF04733
565655.ECBG_02630(PF06824)
565655.ECBG_02336(PF13529)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================