Metamenu

Effective results for Enhydrobacter aerosaccus SK60 (eggnog40)

Summary

Number of putative secreted proteins: 16
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 7 eukaryotic-like domains, contained in 16 proteins (1 high, 15 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
553217.ENHAE0001_0592(PF09330)mitochondrial
553217.ENHAE0001_0568(PF12872)(ER)
553217.ENHAE0001_0328(PF09330)not used
553217.ENHAE0001_1022(PF10013)not used
553217.ENHAE0001_2204(PF10544)
553217.ENHAE0001_2358(PF01051)
553217.ENHAE0001_0502(PF12872)
553217.ENHAE0001_1441(PF01051)
553217.ENHAE0001_1433PF00910
553217.ENHAE0001_1429(PF01051)
553217.ENHAE0001_2058(PF01051)
553217.ENHAE0001_1183(PF01051)
553217.ENHAE0001_0365(PF14328)
553217.ENHAE0001_1189(PF10544)
553217.ENHAE0001_0038(PF12872)
553217.ENHAE0001_0007(PF01051)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================