Metamenu

Effective results for Corynebacterium aurimucosum ATCC 700975 (eggnog40)

Summary

Number of putative secreted proteins: 17
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 10 eukaryotic-like domains, contained in 17 proteins (2 high, 15 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
548476.CaurA7_010100011789(PF13367)ER
548476.CaurA7_010100011779(PF13367)ER
548476.CaurA7_010100004240(PF13367)ER
548476.CaurA7_010100009327(PF14078)(ER)
548476.CaurA7_010100002049(PF08310)ER; (ER)
548476.CaurA7_010100008613(PF08354)(mitochondrial)
548476.CaurA7_010100004877(PF08310)not used
548476.CaurA7_010100006216(PF01490)
548476.CaurA7_010100002843(PF11070)not used
548476.CaurA7_010100004090(PF05495)
548476.CaurA7_010100008438(PF08310)
548476.CaurA7_010100006551(PF14078)
548476.CaurA7_010100002259(PF01195)
548476.CaurA7_010100002289(PF01195)
548476.CaurA7_010100008123PF01745
548476.CaurA7_010100004937(PF08310)
548476.CaurA7_010100008543PF08213not used

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================