Metamenu

Effective results for Fusobacterium periodonticum ATCC 33693 (eggnog40)

Summary

Number of putative secreted proteins: 59
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 17 eukaryotic-like domains, contained in 59 proteins (3 high, 56 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
546275.FUSPEROL_01361(PF03083)ER
546275.FUSPEROL_00704(PF09511)mitochondrial; (mitochondrial)
546275.FUSPEROL_01818(PF03083)(ER)
546275.FUSPEROL_01809(PF01693)(mitochondrial)
546275.FUSPEROL_02112(PF13392)(mitochondrial)
546275.FUSPEROL_01040(PF01496)ER
546275.FUSPEROL_00659(PF02661)mitochondrial
546275.FUSPEROL_00351(PF03797)mitochondrial; (mitochondrial)
546275.FUSPEROL_00279(PF01496)mitochondrial; (mitochondrial)
546275.FUSPEROL_00978(PF03797)ER
546275.FUSPEROL_01961(PF13087)mitochondrial
546275.FUSPEROL_00488(PF03797)ER
546275.FUSPEROL_00010(PF03797)(mitochondrial)
546275.FUSPEROL_01921(PF13087) (PF13086)
546275.FUSPEROL_02293PF04927(mitochondrial); not used
546275.FUSPEROL_02273(PF02971) (PF07837)
546275.FUSPEROL_00239(PF13087) (PF13086)
546275.FUSPEROL_01433(PF13087) (PF13086)
546275.FUSPEROL_00496(PF03797)not used
546275.FUSPEROL_00710(PF03797)not used
546275.FUSPEROL_00712(PF03797)not used
546275.FUSPEROL_01396(PF03797)
546275.FUSPEROL_01142(PF01610)not used
546275.FUSPEROL_01141(PF03797)
546275.FUSPEROL_01038(PF01991)
546275.FUSPEROL_00453(PF03797)
546275.FUSPEROL_02587(PF02661)
546275.FUSPEROL_02580(PF01610)not used
546275.FUSPEROL_00506(PF02661)
546275.FUSPEROL_02609(PF03797)not used
546275.FUSPEROL_02605(PF01610)not used
546275.FUSPEROL_02110(PF13392)
546275.FUSPEROL_02336(PF01610)not used
546275.FUSPEROL_02324(PF09234)
546275.FUSPEROL_01738PF11443
546275.FUSPEROL_01106(PF02661)
546275.FUSPEROL_00079(PF02661)
546275.FUSPEROL_00075(PF03797)
546275.FUSPEROL_00076(PF03797)
546275.FUSPEROL_00040(PF03797)not used
546275.FUSPEROL_02589(PF01610)
546275.FUSPEROL_01203(PF02661)
546275.FUSPEROL_00532(PF03797)
546275.FUSPEROL_00782(PF02661)
546275.FUSPEROL_00131(PF03797)
546275.FUSPEROL_00353(PF01610)not used
546275.FUSPEROL_02478(PF02661)
546275.FUSPEROL_02611(PF03797)not used
546275.FUSPEROL_02448(PF01610)not used
546275.FUSPEROL_01620PF02987
546275.FUSPEROL_02184(PF01693)
546275.FUSPEROL_02054(PF13392)
546275.FUSPEROL_02055(PF13392)
546275.FUSPEROL_01180(PF03797)not used
546275.FUSPEROL_01518(PF01610)not used
546275.FUSPEROL_01286(PF09234)
546275.FUSPEROL_01287(PF09234)
546275.FUSPEROL_02606(PF03797)not used
546275.FUSPEROL_01973(PF02661)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================