Metamenu

Effective results for Veillonella dispar ATCC 17748 (eggnog40)

Summary

Number of putative secreted proteins: 11
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 4 eukaryotic-like domains, contained in 11 proteins (0 high, 11 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
546273.VEIDISOL_00520(PF00939)ER
546273.VEIDISOL_01341(PF00939)ER
546273.VEIDISOL_00557(PF00939)ER
546273.VEIDISOL_01816(PF00939)ER
546273.VEIDISOL_00788(PF03083)ER; (ER)
546273.VEIDISOL_00858(PF00939)(mitochondrial)
546273.VEIDISOL_00676(PF03083)
546273.VEIDISOL_01406(PF04991)
546273.VEIDISOL_01318(PF09511)
546273.VEIDISOL_00023(PF04991)
546273.VEIDISOL_00020(PF04991)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

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EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
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