Metamenu

Effective results for Anaerococcus lactolyticus ATCC 51172 (eggnog40)

Summary

Number of putative secreted proteins: 33
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 13 eukaryotic-like domains, contained in 33 proteins (0 high, 33 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
525254.HMPREF0072_0084(PF02361)(ER); ER
525254.HMPREF0072_1110(PF01813)mitochondrial
525254.HMPREF0072_1117(PF01496)(mitochondrial)
525254.HMPREF0072_2107(PF11070)ER
525254.HMPREF0072_2209(PF02361)ER
525254.HMPREF0072_1466(PF02361)ER
525254.HMPREF0072_0053(PF16199)ER
525254.HMPREF0072_1960(PF02361)
525254.HMPREF0072_0951(PF00834)
525254.HMPREF0072_0187(PF02361)
525254.HMPREF0072_2237(PF02361)
525254.HMPREF0072_1112(PF16886)
525254.HMPREF0072_1113(PF01990)
525254.HMPREF0072_1114(PF01992)
525254.HMPREF0072_1115(PF01991)
525254.HMPREF0072_0210(PF02361)
525254.HMPREF0072_1254(PF04383)
525254.HMPREF0072_0331(PF16199)
525254.HMPREF0072_1128(PF01969)
525254.HMPREF0072_1127(PF01969)
525254.HMPREF0072_0794(PF04383)
525254.HMPREF0072_0062(PF00834)
525254.HMPREF0072_1526(PF12646)
525254.HMPREF0072_1930(PF02361)
525254.HMPREF0072_1554(PF16199)
525254.HMPREF0072_0450(PF01496)
525254.HMPREF0072_0452(PF01992)
525254.HMPREF0072_0447(PF01991)
525254.HMPREF0072_0446(PF16886)
525254.HMPREF0072_0444(PF01813)
525254.HMPREF0072_0448(PF01990)
525254.HMPREF0072_0710(PF02361)
525254.HMPREF0072_1416(PF00834)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================