Effective results for Tepidanaerobacter acetatoxydans (eggnog40)

Summary

Number of putative secreted proteins: 35
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 23 eukaryotic-like domains, contained in 35 proteins (3 high, 32 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
499229.TepRe1_0593				(PF06071)	(mitochondrial)
499229.TepRe1_2076				(PF01813)	(mitochondrial); mitochondrial
499229.TepRe1_1567				PF03727 PF00349
499229.TepRe1_0775				(PF07837) (PF02971)
499229.TepRe1_0115				(PF05034) (PF07476)
499229.TepRe1_2310				(PF08357)
499229.TepRe1_2312				PF12569
499229.TepRe1_0552				(PF04961)
499229.TepRe1_1752				(PF09861)
499229.TepRe1_2081				(PF01991)
499229.TepRe1_2080				(PF01992)
499229.TepRe1_2083				(PF01496)
499229.TepRe1_0777				(PF04961)
499229.TepRe1_0574				(PF07892)
499229.TepRe1_0117				(PF14330)
499229.TepRe1_2078				(PF16886)
499229.TepRe1_2079				(PF01990)
499229.TepRe1_0137				(PF09861)
499229.TepRe1_2272				(PF09861)
499229.TepRe1_0422				(PF03266)
499229.TepRe1_0508				(PF01992)
499229.TepRe1_0677				(PF01409)
499229.TepRe1_0678				(PF01409)
499229.TepRe1_2020				(PF09861)
499229.TepRe1_0509				(PF01496)
499229.TepRe1_1805				(PF09861)
499229.TepRe1_0511				(PF01990)
499229.TepRe1_0513				(PF16886)
499229.TepRe1_0512				(PF01991)
499229.TepRe1_0515				(PF01813)
499229.TepRe1_0859				PF04803
499229.TepRe1_2214				(PF07892)
499229.TepRe1_0455				(PF02475)
499229.TepRe1_0849				(PF06071)
499229.TepRe1_0304				(PF04961)

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================