Metamenu

Effective results for Stackebrandtia nassauensis DSM 44728 (eggnog40)

Summary

Number of putative secreted proteins: 329
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 65 eukaryotic-like domains, contained in 329 proteins (55 high, 274 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
446470.Snas_3686(PF12972) (PF12971) (PF05089)ER
446470.Snas_0065PF00931 (PF03704) (PF13424)(ER)
446470.Snas_5673(PF17103) (PF17101) (PF11380) (PF17102)
446470.Snas_5672(PF17103) (PF17101) (PF11380) (PF17102)
446470.Snas_3637PF00931 (PF13424)(mitochondrial)
446470.Snas_0601(PF03704) (PF13424)mitochondrial; (mitochondrial)
446470.Snas_5531PF00931 (PF03704)(mitochondrial)
446470.Snas_0899PF00931 (PF03704) (PF13424)(mitochondrial)
446470.Snas_1245PF00931 (PF03704)(ER)
446470.Snas_3863PF00931 (PF03704) (PF13424)(plastid)
446470.Snas_2958PF00931 (PF03704) (PF13424)(mitochondrial)
446470.Snas_3989PF00931 (PF03704) (PF13424)plastid
446470.Snas_5360PF00931 (PF03704) (PF13424)(plastid)
446470.Snas_1567(PF13564)ER
446470.Snas_5126(PF03704)(mitochondrial)
446470.Snas_3782PF00931 (PF03704) (PF13424)
446470.Snas_3959(PF13564)ER
446470.Snas_6276(PF08570)ER
446470.Snas_2596(PF00398)(mitochondrial)
446470.Snas_3874PF00931 (PF03704) (PF13424)
446470.Snas_1496PF00931 (PF03704) (PF13424)
446470.Snas_2609(PF13564)ER
446470.Snas_2605(PF13564)ER
446470.Snas_5498(PF00089)ER
446470.Snas_5497(PF00089)ER
446470.Snas_1649(PF13564)ER
446470.Snas_4155(PF00144)ER
446470.Snas_3332PF00931 (PF03704) (PF13424)
446470.Snas_5261(PF13460)(mitochondrial); (plastid)
446470.Snas_4300(PF13460)(mitochondrial)
446470.Snas_5653(PF13460)(mitochondrial)
446470.Snas_0687PF00931 (PF03704) (PF13424)
446470.Snas_4689(PF00144)ER
446470.Snas_3977PF00931 (PF03704) (PF13424)
446470.Snas_1599(PF01580)mitochondrial
446470.Snas_0425(PF00089)ER
446470.Snas_5593(PF00144)ER
446470.Snas_0852(PF10067)ER
446470.Snas_0853PF00931 (PF03704) (PF13424)
446470.Snas_6450PF01607ER
446470.Snas_2750(PF08386)ER
446470.Snas_5018(PF00089)ER
446470.Snas_0994PF00931 (PF03704)(plastid)
446470.Snas_2100(PF14273)ER
446470.Snas_5382(PF10067)ER
446470.Snas_0600(PF00089)ER
446470.Snas_1735(PF01872)ER
446470.Snas_5735(PF01872)ER
446470.Snas_5538(PF02401)(mitochondrial)
446470.Snas_2269PF12256 (PF03534) PF12255
446470.Snas_2260(PF13810)ER
446470.Snas_1770(PF13424)(mitochondrial)
446470.Snas_2529(PF05729)ER
446470.Snas_3554(PF01872)(mitochondrial)
446470.Snas_4917(PF13559)ER
446470.Snas_4269(PF01580)(mitochondrial)
446470.Snas_4267(PF13460)(mitochondrial)
446470.Snas_1966(PF10067)ER
446470.Snas_5306(PF00144)ER
446470.Snas_0796PF00931 (PF03704)(plastid)
446470.Snas_4796(PF00089)ER
446470.Snas_3211(PF00089)ER
446470.Snas_4482PF00931 (PF03704) (PF13424)
446470.Snas_3533(PF13653)ER
446470.Snas_3258(PF11175)(ER)
446470.Snas_5627(PF13460)mitochondrial; (mitochondrial)
446470.Snas_1671(PF00144)ER
446470.Snas_2285(PF08570)ER
446470.Snas_3884PF00931 (PF03704) (PF13424)
446470.Snas_5818(PF00089)ER
446470.Snas_2636PF00931 (PF03704) (PF13424)
446470.Snas_0072(PF06241)(mitochondrial)
446470.Snas_0929(PF14087)ER
446470.Snas_5150(PF00144)(mitochondrial)
446470.Snas_5446PF05139mitochondrial
446470.Snas_0900PF00931 (PF03704) (PF13424)
446470.Snas_0228(PF13460)(mitochondrial); (plastid)
446470.Snas_3924(PF13559)ER
446470.Snas_4690(PF00144)mitochondrial; ER
446470.Snas_5875(PF00089)ER
446470.Snas_5250(PF00089)ER
446470.Snas_1158(PF12222)ER
446470.Snas_1361(PF13564)ER
446470.Snas_1366(PF00144)ER
446470.Snas_1094(PF00144)ER
446470.Snas_1894PF12256 (PF03534) PF12255
446470.Snas_1893PF12256 (PF03534) PF12255
446470.Snas_2312(PF00144)ER; (mitochondrial)
446470.Snas_1642(PF05729)ER
446470.Snas_3684PF00931 (PF03704) (PF13424)
446470.Snas_2155PF12256 (PF03534) PF12255
446470.Snas_3352(PF00144)ER
446470.Snas_2970(PF13810)mitochondrial
446470.Snas_3090(PF05729)ER
446470.Snas_0840(PF14273)ER
446470.Snas_5023(PF13564)ER
446470.Snas_4551(PF01872)(ER)
446470.Snas_1847(PF13559)(ER); ER
446470.Snas_3391(PF00144)ER
446470.Snas_3071(PF13460)(ER)
446470.Snas_5959(PF00089)ER
446470.Snas_5043(PF12972) (PF12971) (PF05089)
446470.Snas_6090(PF08386)ER
446470.Snas_6091(PF08386)ER
446470.Snas_5726(PF01022)ER
446470.Snas_2275(PF00089)mitochondrial
446470.Snas_5522(PF13810)(ER)
446470.Snas_5084(PF08386)(mitochondrial)
446470.Snas_1587(PF13559)ER
446470.Snas_1768PF00931 (PF03704) (PF13424)
446470.Snas_1973PF00931 (PF03704) (PF13424)
446470.Snas_2050(PF01022)(mitochondrial)
446470.Snas_1954(PF01022)(mitochondrial)
446470.Snas_0641PF00931 (PF13424)
446470.Snas_0196PF00931 (PF03704)
446470.Snas_1216(PF00163)(mitochondrial)
446470.Snas_6294(PF00144)(ER)
446470.Snas_0272(PF13460)(mitochondrial)
446470.Snas_5612(PF13460)(mitochondrial)
446470.Snas_4139PF00931 (PF03704)
446470.Snas_1333(PF00298) (PF03946)
446470.Snas_5964(PF00298) (PF03946)
446470.Snas_3386PF00931 (PF13424)
446470.Snas_4017(PF03704) (PF13424)
446470.Snas_5286PF00931 (PF13424)
446470.Snas_1575(PF10067)(plastid)
446470.Snas_0797PF00931 (PF03704)
446470.Snas_2563(PF05729)(ER)
446470.Snas_0157(PF01580)(mitochondrial)
446470.Snas_6001(PF13460)(plastid)
446470.Snas_6264(PF14216)(plastid)
446470.Snas_3187(PF00144)(mitochondrial)
446470.Snas_3532PF00931 (PF13424)
446470.Snas_3605(PF05729)(ER)
446470.Snas_1634(PF03704)(ER)
446470.Snas_6346PF00931 (PF03704)
446470.Snas_1360(PF13460)(mitochondrial)
446470.Snas_1392(PF05729)(plastid)
446470.Snas_1875PF00931 (PF03704)
446470.Snas_4966PF00931 (PF03704)
446470.Snas_3059PF00931 (PF03704)
446470.Snas_1999(PF02401)(plastid)
446470.Snas_0598(PF05147)(mitochondrial)
446470.Snas_0717(PF03703)
446470.Snas_1787(PF00797)
446470.Snas_2552(PF13468)
446470.Snas_4786(PF06441)
446470.Snas_3204(PF05719)
446470.Snas_1951(PF14087)
446470.Snas_2031(PF13468)
446470.Snas_2781(PF00398)
446470.Snas_2786(PF06441)
446470.Snas_2787(PF06441)
446470.Snas_3870(PF02575)
446470.Snas_1064(PF13424)
446470.Snas_5661(PF02575)
446470.Snas_4295(PF07931)
446470.Snas_1008(PF00398)
446470.Snas_5371(PF01022)
446470.Snas_5374(PF03243)
446470.Snas_5375(PF03243)
446470.Snas_0230(PF01872)
446470.Snas_2412(PF13424)
446470.Snas_5829(PF06441)
446470.Snas_5618(PF00144)
446470.Snas_5616(PF03704)
446470.Snas_1522(PF13367)
446470.Snas_3114(PF00012)
446470.Snas_4727(PF00144)
446470.Snas_3708(PF13468)
446470.Snas_3871(PF02575)
446470.Snas_5845(PF05719)
446470.Snas_5268(PF01872)
446470.Snas_6187(PF13460)
446470.Snas_2640(PF01872)
446470.Snas_5989(PF13367)
446470.Snas_6374(PF03704)
446470.Snas_3562(PF00144)
446470.Snas_5240(PF14027)
446470.Snas_1161(PF01234)
446470.Snas_1373PF05139
446470.Snas_0974(PF00772)
446470.Snas_0972(PF01580)
446470.Snas_1888PF05139
446470.Snas_1889(PF07931)
446470.Snas_4688(PF00144)
446470.Snas_0764(PF02401)
446470.Snas_5418(PF05147)
446470.Snas_3100(PF03704)
446470.Snas_4732PF05139
446470.Snas_3970(PF01872)
446470.Snas_0403(PF13460)
446470.Snas_0401(PF05719)
446470.Snas_0407(PF01580)
446470.Snas_2490(PF03703)
446470.Snas_2491(PF03703)
446470.Snas_5750(PF01872)
446470.Snas_1120(PF06441)
446470.Snas_2772PF00931
446470.Snas_3179(PF05719)
446470.Snas_5438(PF00772)
446470.Snas_1339(PF13460)
446470.Snas_3694(PF01872)
446470.Snas_5597(PF00144)
446470.Snas_3340(PF01872)
446470.Snas_0217(PF05147)
446470.Snas_1345PF00931
446470.Snas_4978(PF06441)
446470.Snas_3651(PF15891)
446470.Snas_3650(PF08386)
446470.Snas_0991(PF01580)
446470.Snas_0295(PF00643)
446470.Snas_2927(PF06441)
446470.Snas_0871(PF11918)
446470.Snas_5380(PF01022)
446470.Snas_5386(PF01022)
446470.Snas_5389(PF01022)
446470.Snas_2441(PF01022)
446470.Snas_0467(PF00144)
446470.Snas_0466(PF03704)
446470.Snas_0460(PF05729)
446470.Snas_0468(PF00144)
446470.Snas_1730(PF01022)
446470.Snas_3310(PF00144)
446470.Snas_5453(PF01872)
446470.Snas_4609(PF00797)
446470.Snas_3385(PF06441)
446470.Snas_5731(PF01872)
446470.Snas_6147(PF02575)
446470.Snas_6418(PF01022)
446470.Snas_2712PF05139
446470.Snas_5280(PF00012)
446470.Snas_0349(PF00772)
446470.Snas_5071(PF03703)
446470.Snas_5070(PF03703)
446470.Snas_0649(PF01022)
446470.Snas_0137(PF00772)
446470.Snas_6358(PF00012)
446470.Snas_2693(PF00012)
446470.Snas_6206(PF00144)
446470.Snas_0366(PF00012)
446470.Snas_3304(PF06441)
446470.Snas_3636(PF09683)
446470.Snas_5799(PF01872)
446470.Snas_3571(PF01872)
446470.Snas_2821(PF03703)
446470.Snas_2820(PF03703)
446470.Snas_0795(PF03703)
446470.Snas_6025(PF00144)
446470.Snas_2565(PF00144)
446470.Snas_0092(PF00797)
446470.Snas_0093(PF00797)
446470.Snas_3512(PF00144)
446470.Snas_3675(PF00012)
446470.Snas_0151(PF00144)
446470.Snas_6265(PF00772)
446470.Snas_1691(PF06441)
446470.Snas_1690(PF13564)
446470.Snas_4166(PF03704)
446470.Snas_1266(PF13460)
446470.Snas_1263(PF00144)
446470.Snas_3259(PF13468)
446470.Snas_3257(PF08386)
446470.Snas_1904(PF01872)
446470.Snas_2283(PF01022)
446470.Snas_2282(PF01022)
446470.Snas_5367(PF01872)
446470.Snas_4770(PF13564)
446470.Snas_3279(PF00797)
446470.Snas_5377(PF01022)
446470.Snas_3603(PF05147)
446470.Snas_5995(PF13564)
446470.Snas_0019(PF00144)
446470.Snas_3591(PF13424)
446470.Snas_0643(PF00012)
446470.Snas_0694(PF01580)
446470.Snas_3124(PF11175)
446470.Snas_4864(PF04455)
446470.Snas_3801(PF03704)
446470.Snas_4934(PF00163)
446470.Snas_0774(PF01789)
446470.Snas_2954PF00931
446470.Snas_2763(PF13460)
446470.Snas_5633PF00931
446470.Snas_2156(PF03538)
446470.Snas_3682PF05139
446470.Snas_3422(PF01022)
446470.Snas_3429(PF01022)
446470.Snas_5747(PF13460)
446470.Snas_2974(PF00012)
446470.Snas_1449(PF13460)
446470.Snas_3425(PF01022)
446470.Snas_3406(PF14027)
446470.Snas_5765PF08213not used
446470.Snas_5393(PF01022)
446470.Snas_4805(PF02575)
446470.Snas_6231(PF03803)
446470.Snas_3399(PF03704)
446470.Snas_2935(PF08662)
446470.Snas_3550(PF00012)
446470.Snas_4051(PF13460)
446470.Snas_2707(PF01872)
446470.Snas_2259(PF00144)
446470.Snas_3070(PF08386)
446470.Snas_5958(PF10067)
446470.Snas_5956(PF01872)
446470.Snas_0679(PF01580)
446470.Snas_4105(PF00797)
446470.Snas_1722(PF01022)
446470.Snas_2130(PF01580)
446470.Snas_2274(PF01872)
446470.Snas_5065(PF06441)
446470.Snas_1297PF05139
446470.Snas_2517(PF02575)
446470.Snas_2518(PF02575)
446470.Snas_1991(PF03936)
446470.Snas_1996(PF02401)
446470.Snas_0352(PF00012)
446470.Snas_6177PF05139
446470.Snas_4028(PF01872)
446470.Snas_1501(PF00144)
446470.Snas_1507(PF01872)
446470.Snas_4919(PF05719)
446470.Snas_2684(PF02575)
446470.Snas_3486(PF05147)
446470.Snas_3484(PF03704)
446470.Snas_3482PF00931
446470.Snas_4278(PF13367)
446470.Snas_3544(PF01022)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================