Effective results for Bacillus halodurans C-125 (eggnog40)

Summary

Number of putative secreted proteins: 82
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 14 eukaryotic-like domains, contained in 82 proteins (41 high, 41 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
272558.BH0119(PF00298) (PF03946)mitochondrial; (mitochondrial)
272558.BH3600PF13863ER
272558.BH1312(PF06695)ER
272558.BH0279(PF09683)ER
272558.BH0785(PF03644)ER
272558.BH0413(PF03423)ER
272558.BH1234(PF06695)ER
272558.BH2765(PF02812) (PF00208)
272558.BH2774PF01610(mitochondrial)
272558.BH2967PF01610(mitochondrial)
272558.BH0824(PF02812) (PF00208)
272558.BH0218(PF02812) (PF00208)
272558.BH1307PF01610(mitochondrial)
272558.BH0270PF01610(mitochondrial)
272558.BH2101(PF02812) (PF00208)
272558.BH0245PF01610(mitochondrial)
272558.BH0409(PF00298) (PF03946)
272558.BH1170PF01610(mitochondrial)
272558.BH3942(PF02812) (PF00208)
272558.BH2718(PF02812) (PF00208)
272558.BH1622(PF02812) (PF00208)
272558.BH3565PF01610
272558.BH1701PF01610
272558.BH4005(PF05598)
272558.BH4009(PF06445)
272558.BH2377PF01610
272558.BH1049PF01610
272558.BH0123PF01610
272558.BH1054(PF05598)
272558.BH0057(PF00398)
272558.BH1473PF01610
272558.BH1183PF01610
272558.BH2978PF01610
272558.BH2979(PF07653)
272558.BH3752PF01610
272558.BH0594(PF06445)
272558.BH3247PF01610
272558.BH0981(PF05598)
272558.BH2696(PF05598)
272558.BH3634(PF06445)
272558.BH3635(PF05598)
272558.BH3633(PF06445)
272558.BH1412PF01610
272558.BH2204PF01610
272558.BH3137PF01610
272558.BH0682(PF05598)
272558.BH0668PF01610
272558.BH1427(PF05598)
272558.BH1338PF01610
272558.BH2651PF01610
272558.BH3499PF01610
272558.BH3496(PF06445)
272558.BH1929PF01610
272558.BH0275(PF05598)
272558.BH2641PF01610
272558.BH0089PF01610
272558.BH1686PF01610
272558.BH2070(PF05598)
272558.BH1901(PF05598)
272558.BH3218(PF06445)
272558.BH0416PF01610
272558.BH3506(PF06445)
272558.BH3507PF01610
272558.BH1347PF01610
272558.BH2119(PF06445)
272558.BH0401(PF06445)
272558.BH2477PF01610
272558.BH2472PF01610
272558.BH2056(PF00398)
272558.BH1963PF01610
272558.BH3985(PF05598)
272558.BH0767PF01610
272558.BH0765(PF05598)
272558.BH4047(PF06445)
272558.BH2922PF01610
272558.BH1946PF01610
272558.BH1546PF01610
272558.BH0380(PF00398)
272558.BH2841(PF05598)
272558.BH0954PF01610
272558.BH3409PF01610
272558.BH0379PF01610

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================