Metamenu

Effective results for Wolbachia endosymbiont of Drosophila melanogaster (eggnog40)

Summary

Number of putative secreted proteins: 83
- Predicted by T4SEpre: 77
- Predicted by EffectiveELD: 6 eukaryotic-like domains, contained in 28 proteins (1 high, 27 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type IV

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
163164.WD0147(PF12796) (PF00023)mitochondrial
163164.WD0462+PF14932(ER)
163164.WD0213+ER
163164.WD0566(PF12796)(ER); ER
163164.WD0514+(PF12796) (PF13637)
163164.WD0429+ER
163164.WD0637+(PF12796) (PF00023)
163164.WD0541+(mitochondrial)
163164.WD0008+ER
163164.WD0548+(mitochondrial)
163164.WD1111+ER
163164.WD0583(PF13481)(ER)
163164.WD0832+ER
163164.WD0830+(ER)
163164.WD1055+ER
163164.WD0026+(PF02902)
163164.WD0550(PF12796) (PF13637)
163164.WD0887(PF13481)(plastid)
163164.WD0073(PF12796) (PF00023)
163164.WD0596+(PF12796)
163164.WD0292+(PF13637)
163164.WD0780+(mitochondrial)
163164.WD0498(PF12796) (PF13637)
163164.WD1057+(mitochondrial)
163164.WD0696+
163164.WD0697+
163164.WD1269+
163164.WD1228+
163164.WD0335+
163164.WD1002+
163164.WD0802+
163164.WD1319+
163164.WD1202+
163164.WD0383+
163164.WD0385(PF12796)
163164.WD0636(PF12796)
163164.WD0464+
163164.WD0964+
163164.WD0688+
163164.WD0569+
163164.WD0361+
163164.WD1039+
163164.WD0754(PF12796)
163164.WD0035(PF12796)
163164.WD1281+
163164.WD0633(PF12796)
163164.WD0733+
163164.WD0812+
163164.WD0928+
163164.WD1080+
163164.WD1178+
163164.WD1175+
163164.WD0285(PF12796)
163164.WD0286(PF12796)
163164.WD0472+
163164.WD1023+
163164.WD0332+
163164.WD0602+
163164.WD0609(PF13481)
163164.WD0217+
163164.WD0139+
163164.WD0438(PF00023)
163164.WD0435+
163164.WD0942+
163164.WD0975+
163164.WD0024+
163164.WD0529+
163164.WD0291(PF12796)
163164.WD0294(PF12796)
163164.WD0766(PF12796)
163164.WD0191(PF00023)
163164.WD0838+
163164.WD0584+
163164.WD0582(PF13481)
163164.WD0839+
163164.WD0589(PF13481)
163164.WD0445+
163164.WD0611+
163164.WD0978+
163164.WD0576+
163164.WD0570+
163164.WD1127+
163164.WD0580+

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 1.2 (12/10 KEGG proteins)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================