Genomes encoding eukaryotic-like proteins
PF13560 Helix-turn-helix domain
Copy number in non-pathogens:
Mean=7.37 Stddev=14.85
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
Genome | Class* | ELD score | Number of proteins containing this domain |
---|---|---|---|
Nocardia yamanashiensis NBRC 100130 | s | 4 | 75 |
Streptomyces turgidiscabies | s | 4 | 72 |
Streptomyces acidiscabies | s | 5 | 90 |
Streptomyces acidiscabies | s | 5 | 87 |
Nocardia asiatica NBRC 100129 | s | 4 | 72 |
Nocardia abscessus NBRC 100374 | s | 4 | 74 |
Nocardia concava NBRC 100430 | s | 4 | 79 |
Nocardia transvalensis NBRC 15921 | s | 4 | 70 |
Streptomyces turgidiscabies Car8 | s | 4 | 74 |
Streptomyces ipomoeae 91-03 | s | 4 | 70 |
Lentzea albidocapillata | s | 4 | 76 |
Pseudonocardia acaciae DSM 45401 | s | 4 | 80 |
Streptomyces acidiscabies | s | 5 | 91 |
Streptomyces europaeiscabiei | s | 4 | 67 |
Streptomyces scabiei | s | 4 | 71 |
Streptomyces acidiscabies | s | 5 | 90 |
Streptomyces acidiscabies | s | 5 | 84 |
Streptomyces acidiscabies | s | 5 | 94 |
Streptomyces acidiscabies | s | 5 | 90 |
Lentzea albidocapillata | s | 4 | 76 |
Streptomyces rhizosphaericus | s | 5 | 93 |
Lentzea kentuckyensis | s | 4 | 74 |
*p=pathogen;s=symbiont