Metamenu

Genomes encoding eukaryotic-like proteins

PF08402 TOBE domain

Copy number in non-pathogens:
Mean=4.49 Stddev=6.45

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Rhizobium leguminosarum bv. trifolii WSM2297 s 5 40
Rhizobium rhizogenes NBRC 13257 s 5 42
Mesorhizobium loti MAFF303099 s 4 36
Rhizobium leguminosarum bv. viciae 3841 s 6 44
Sinorhizobium fredii HH103 s 4 31
Sinorhizobium meliloti Rm41 s 5 40
Mesorhizobium metallidurans STM 2683 s 4 36
Mesorhizobium plurifarium s 4 32
Mesorhizobium plurifarium s 4 31
Mesorhizobium plurifarium s 5 37
Rhizobium favelukesii s 5 38
Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 s 6 45
Neorhizobium galegae bv. orientalis str. HAMBI 540 s 6 44
Rhizobium sullae s 7 52
Rhizobium leguminosarum bv. trifolii WSM2304 s 5 41
Rhizobium leguminosarum bv. trifolii WSM1325 s 5 42
Rhizobium sp. AP16 s 5 37
Rhizobium sp. CF080 s 6 49
Rhizobium sp. CF122 s 4 35
Rhizobium sp. CF142 s 7 53
Agrobacterium albertimagni AOL15 s 4 31
Mesorhizobium opportunistum WSM2075 p 4 33
Rhizobium giardinii bv. giardinii H152 s 4 36
Sinorhizobium medicae WSM1115 s 5 39
Rhizobium leguminosarum bv. trifolii SRDI565 s 5 41
Rhizobium leguminosarum bv. viciae 248 s 6 45
Mesorhizobium loti NZP2037 s 5 39
Ensifer sp. BR816 s 4 35
Rhizobium leguminosarum bv. phaseoli 4292 s 5 39
Rhizobium leguminosarum bv. viciae WSM1481 s 6 48
Rhizobium leguminosarum bv. trifolii SRDI943 s 5 43
Rhizobium leguminosarum bv. viciae WSM1455 s 6 47
Rhizobium leguminosarum bv. trifolii WSM597 s 5 42
Rhizobium leguminosarum bv. trifolii WSM2012 s 5 42
Mesorhizobium sp. L103C119B0 s 4 33
Mesorhizobium sp. LNHC221B00 s 4 32
Mesorhizobium sp. LNJC384A00 s 4 34
Mesorhizobium sp. LNJC386A00 s 4 31
Mesorhizobium sp. LNJC391B00 s 4 32
Mesorhizobium sp. LNJC395A00 s 4 31
Mesorhizobium sp. LNJC403B00 s 4 32
Sinorhizobium meliloti 4H41 s 5 43
Rhizobium favelukesii s 5 40
Rhizobium mongolense USDA 1844 s 5 37
Ensifer sp. USDA 6670 s 6 47
Sinorhizobium arboris LMG 14919 s 5 37
Sinorhizobium meliloti WSM4191 s 6 48
Sinorhizobium meliloti CIAM1775 s 4 36
Mesorhizobium sp. WSM3224 s 5 37
Rhizobium mesoamericanum STM6155 s 5 38
Sinorhizobium meliloti GVPV12 s 4 33
Pleomorphomonas oryzae DSM 16300 s 5 37
Sinorhizobium meliloti BO21CC s 4 32
Sinorhizobium meliloti AK58 s 4 35
Sinorhizobium meliloti Mlalz-1 s 4 36
Sinorhizobium medicae WSM244 s 5 43
Sinorhizobium meliloti MVII-I s 4 32
Rhizobium leguminosarum bv. viciae GB30 s 7 50
Rhizobium leguminosarum bv. viciae Vh3 s 6 48
Rhizobium leguminosarum bv. viciae Ps8 s 6 45
Rhizobium leguminosarum bv. trifolii TA1 s 5 41
Mesorhizobium erdmanii USDA 3471 s 5 38
Rhizobium leguminosarum bv. viciae Vc2 s 7 53
Mesorhizobium loti CJ3sym s 5 41
Inquilinus limosus DSM 16000 s 4 36
Rhizobium leguminosarum bv. viciae VF39 s 6 45
Rhizobium leguminosarum bv. viciae UPM1131 s 5 41
Rhizobium sullae WSM1592 s 6 47
Rhizobium leguminosarum bv. viciae UPM1137 s 5 43
Sinorhizobium meliloti RRl128 s 4 35
Sinorhizobium medicae DI28 s 5 40
Rhizobium leguminosarum bv. phaseoli FA23 s 6 45
Rhizobium gallicum bv. gallicum R602sp s 5 38
Rhizobium sp. CCGE 510 s 4 32
Rhizobium etli CNPAF512 s 4 31
Rhizobium grahamii CCGE 502 s 4 32
Rhizobium sp. Kim5 s 4 33
Rhizobium sp. CIAT894 s 4 35
Shinella sp. DD12 s 7 51
Rhizobium freirei PRF 81 s 4 36
Mesorhizobium ciceri ca181 s 4 33
Sinorhizobium meliloti CCNWSX0020 s 5 37
Mesorhizobium amorphae CCNWGS0123 s 5 37
Agrobacterium tumefaciens str. Cherry 2E-2-2 s 4 34
Sinorhizobium meliloti AE608H s 4 31
Sinorhizobium meliloti H1 s 4 33
Agrobacterium tumefaciens P4 s 4 36
Agrobacterium tumefaciens WRT31 s 4 35
Labrenzia sp. DG1229 s 4 34
Rhizobium leguminosarum bv. trifolii CC278f s 6 44
Mesorhizobium loti R7A s 4 33
Sinorhizobium meliloti WSM1022 s 4 36
Ensifer aridi s 4 34
Mesorhizobium sp. WSM1293 s 4 32
Ensifer sp. WSM1721 s 5 38
Mesorhizobium sp. WSM2561 s 5 37
Mesorhizobium sp. WSM3626 s 4 36
Rhizobium leguminosarum bv. trifolii CC283b s 5 39
Mesorhizobium loti R88b s 4 35
Agrobacterium vitis S4 s 4 33
Agrobacterium radiobacter K84 s 5 41
Agrobacterium sp. H13-3 s 4 33
Rhizobium etli CFN 42 s 4 33
Sinorhizobium meliloti GR4 s 4 35
Rhizobium tropici CIAT 899 s 4 34
Sinorhizobium fredii USDA 257 s 4 35
Agrobacterium rhizogenes s 6 44
Sinorhizobium sp. PC2 s 4 35
Rhizobium leguminosarum bv. trifolii WSM1689 s 5 43
Rhizobium leguminosarum bv. trifolii CB782 s 5 40
Agrobacterium rhizogenes s 5 41
Agrobacterium rhizogenes s 7 55
Rhizobium tropici s 5 42
Agrobacterium rhizogenes s 6 46
Rhizobium tropici s 6 45
Rhizobium tropici s 6 44
Agrobacterium rhizogenes s 5 41
Rhizobium tropici s 6 48
Agrobacterium rhizogenes s 5 41
Mesorhizobium huakuii 7653R p 5 37
Sinorhizobium meliloti s 4 34
Ensifer sp. ZNC0028 s 5 42
Martelella endophytica s 6 49
Sinorhizobium meliloti s 5 39
Rhizobium phaseoli s 4 33
Rhizobium phaseoli s 4 32
Rhizobium phaseoli s 4 35
Rhizobium phaseoli s 4 35
Rhizobium phaseoli s 4 36
Rhizobium phaseoli s 4 34
Rhizobium phaseoli s 4 36
Rhizobium phaseoli s 4 34
Rhizobium phaseoli s 4 34
Rhizobium phaseoli s 4 32
Rhizobium phaseoli s 4 34
Rhizobium phaseoli s 4 32
Rhizobium phaseoli s 4 33
Rhizobium sp. N113 s 4 35
Rhizobium sp. N1314 s 4 33
Rhizobium sp. N1341 s 4 35
Rhizobium sp. N621 s 4 35
Rhizobium sp. N6212 s 4 35
Rhizobium sp. N731 s 4 33
Rhizobium sp. N741 s 4 35
Rhizobium sp. N871 s 4 35
Rhizobium sp. N324 s 5 38
Rhizobium sp. N541 s 5 38
Rhizobium sp. N941 s 5 38
Rhizobium gallicum s 5 41
Sinorhizobium meliloti s 4 34
Sinorhizobium meliloti s 4 34
Ensifer aridi s 4 35
Ensifer aridi s 4 33
Ensifer aridi s 4 33
Ensifer aridi s 4 32
Mesorhizobium amorphae CCNWGS0123 s 5 38
Sinorhizobium sp. RAC02 s 5 42
Agrobacterium rhizogenes s 5 37
Mesorhizobium sp. WSM1497 s 4 33
Mesorhizobium loti NZP2037 s 5 39
Agrobacterium vitis s 4 31
Agrobacterium vitis s 4 33
Agrobacterium vitis s 4 31
Agrobacterium vitis s 4 32
Agrobacterium vitis s 4 34
Ensifer shofinae s 4 35
Inquilinus limosus s 5 37
Sinorhizobium meliloti s 4 34
Agrobacterium rhizogenes s 5 38
Agrobacterium vitis s 4 31
Sinorhizobium meliloti s 4 32
Sinorhizobium meliloti s 5 38
Sinorhizobium meliloti s 4 33
Sinorhizobium meliloti s 4 34
Sinorhizobium meliloti s 4 34
Sinorhizobium meliloti s 5 40
Sinorhizobium meliloti s 4 33
Sinorhizobium meliloti s 4 33
Sinorhizobium meliloti s 4 35
Sinorhizobium meliloti s 4 33
Sinorhizobium meliloti 1021 s 4 35
Agrobacterium fabrum str. C58 s 4 34
Sinorhizobium medicae WSM419 s 5 41
Sinorhizobium fredii NGR234 s 4 34
Mesorhizobium ciceri biovar biserrulae WSM1271 s 4 32

*p=pathogen;s=symbiont