Metamenu

Genomes encoding eukaryotic-like proteins

PF04616 Glycosyl hydrolases family 43

Copy number in non-pathogens:
Mean=1.67 Stddev=3.86

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides reticulotermitis JCM 10512 s 6 27
Streptomyces turgidiscabies s 5 21
Bacillus trypoxylicola NBRC 102646 s 4 19
Gorillibacterium massiliense s 4 18
Bacteroides xylanisolvens SD CC 1b s 6 25
Bacteroides xylanisolvens SD CC 2a s 6 25
Bacteroides thetaiotaomicron s 6 26
Paenibacillus riograndensis SBR5 s 5 22
Bacteroides thetaiotaomicron s 9 37
Bacteroides thetaiotaomicron s 7 29
Bacteroides thetaiotaomicron s 5 23
Bacteroides thetaiotaomicron s 6 27
Bacteroides ovatus s 8 34
Bacteroides vulgatus s 5 21
Bacteroides thetaiotaomicron s 6 28
Bacteroides intestinalis DSM 17393 s 10 43
Bacteroides plebeius DSM 17135 s 5 21
Bacteroides dorei DSM 17855 s 6 25
Paenibacillus sp. JDR-2 s 6 28
Bacteroides eggerthii DSM 20697 s 5 21
Bacteroides xylanisolvens SD CC 1b s 6 25
Bacteroides vulgatus PC510 s 5 21
Bacteroides xylanisolvens SD CC 2a s 5 24
Bacteroides ovatus SD CMC 3f s 5 21
Bacteroides cellulosilyticus DSM 14838 s 10 41
Bacteroides sp. 3_1_13 s 6 25
Paraprevotella clara YIT 11840 s 8 33
Paraprevotella xylaniphila YIT 11841 s 7 32
Bacteroides ovatus ATCC 8483 s 7 31
Flavobacterium sp. CF136 s 6 25
Streptomyces turgidiscabies Car8 s 5 21
Clostridium sp. KLE 1755 s 7 31
Bacteroides cellulosilyticus WH2 s 10 43
Dysgonomonas capnocytophagoides DSM 22835 s 6 26
Bacteroides graminisolvens DSM 19988 = JCM 15093 s 5 22
Bacteroides gallinarum DSM 18171 = JCM 13658 s 4 19
Flavobacterium denitrificans DSM 15936 s 4 20
Bacteroides sp. 1_1_6 s 7 30
Bacteroides sp. 2_2_4 s 8 34
Bacteroides sp. 4_3_47FAA s 4 19
Bacteroides sp. 9_1_42FAA s 6 25
Bacteroides sp. D1 s 5 24
Bacteroides sp. D2 s 8 35
Bacteroides dorei 5_1_36/D4 s 7 29
Bacteroides sp. 2_1_22 s 6 25
Bacteroides sp. 3_1_33FAA s 6 26
Bacteroides sp. 3_1_23 s 6 28
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 5 21
Bacteroides ovatus 3_8_47FAA s 7 32
Bacteroides sp. D22 s 4 20
Bacteroides sp. 1_1_30 s 6 26
Bacteroides oleiciplenus YIT 12058 s 13 54
Dysgonomonas gadei ATCC BAA-286 s 8 34
Bacteroides cellulosilyticus CL02T12C19 s 10 42
Bacteroides dorei CL02T00C15 s 6 26
Bacteroides dorei CL02T12C06 s 6 26
Bacteroides dorei CL03T12C01 s 6 26
Bacteroides ovatus CL02T12C04 s 7 31
Bacteroides ovatus CL03T12C18 s 7 32
Bacteroides salyersiae CL02T12C01 s 4 19
Bacteroides xylanisolvens CL03T12C04 s 5 22
Bacteroides faecis MAJ27 s 6 25
Cellvibrio sp. BR s 4 20
Paenibacillus riograndensis SBR5 s 4 19
Paenibacillus mucilaginosus 3016 s 6 26
Bacteroides thetaiotaomicron s 7 29
Bacteroides thetaiotaomicron s 6 28
Bacteroides ovatus s 7 29
Bacteroides dorei CL03T12C01 s 6 26
Bacteroides ovatus s 7 31
Bacteroides thetaiotaomicron s 6 28
Bacteroides caecimuris s 6 25
Bacteroides ovatus s 5 24
Bacteroides thetaiotaomicron s 6 27
Streptomyces scabiei s 4 18
Opitutaceae bacterium TSB47 s 4 19
Bacteroides vulgatus s 4 19
Bacteroides xylanisolvens s 4 20
Bacteroides caecimuris s 6 26
Bacteroides ovatus s 8 34
Bacteroides ovatus s 8 35
Bacteroides xylanisolvens s 5 22
Bacteroides ovatus s 7 31
Bacteroides faecis MAJ27 s 6 25
Eisenbergiella tayi s 5 24
Eisenbergiella tayi s 4 20
Eisenbergiella tayi s 6 25
Eisenbergiella tayi s 5 22
Eisenbergiella tayi s 5 22
Eisenbergiella tayi s 4 19
Eisenbergiella tayi s 4 19
Paenibacillus odorifer s 4 18
Paenibacillus odorifer s 4 18
Paenibacillus odorifer s 4 20
Paenibacillus odorifer s 4 19
Paenibacillus odorifer s 4 19
Paenibacillus odorifer s 4 18
Paenibacillus odorifer s 4 20
Paenibacillus odorifer s 5 22
Paenibacillus odorifer s 4 20
Paenibacillus odorifer s 5 21
Bacteroides thetaiotaomicron s 7 30
Paenibacillus odorifer s 4 20
Paenibacillus odorifer s 4 20
Eisenbergiella tayi s 5 24
Streptomyces scabiei s 4 20
Streptomyces scabiei s 4 19
Bacteroides xylanisolvens s 5 24
Bacteroides xylanisolvens s 6 25
Bacteroides dorei s 6 28
Bacteroides ovatus s 8 34
Bacteroides dorei s 6 25
Bacteroides thetaiotaomicron VPI-5482 s 7 31

*p=pathogen;s=symbiont