Genomes encoding eukaryotic-like proteins

PF03423 Carbohydrate binding domain (family 25)

Copy number in non-pathogens:
Mean=0.04 Stddev=0.22

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Streptomyces turgidiscabies s 4 1
Cellulosimicrobium funkei NBRC 104118 s 4 1
Gardnerella vaginalis ATCC 14018 = JCM 11026 s 4 1
Parascardovia denticolens DSM 10105 = JCM 12538 s 4 1
Timonella senegalensis JC301 s 4 1
Cellulomonas massiliensis JC225 s 4 1
Paenibacillus riograndensis SBR5 s 17 4
Bifidobacterium adolescentis s 4 1
Mobiluncus mulieris 28-1 s 4 1
Micromonospora sp. L5 s 4 1
Gardnerella vaginalis HMP9231 s 4 1
Gardnerella vaginalis 315-A s 4 1
Mobiluncus mulieris ATCC 35243 s 4 1
Paenibacillus sp. HGF7 s 4 1
Mobiluncus mulieris ATCC 35239 s 4 1
Streptomyces sp. ACT-1 s 4 1
Streptomyces sp. PAMC 26508 s 4 1
Streptomyces thermolilacinus SPC6 s 4 1
Bifidobacterium gallicum DSM 20093 = LMG 11596 s 17 4
Gardnerella vaginalis 409-05 s 4 1
Parascardovia denticolens DSM 10105 = JCM 12538 s 4 1
Gardnerella vaginalis 284V s 4 1
Gardnerella vaginalis 75712 s 4 1
Gardnerella vaginalis 0288E s 4 1
Gardnerella vaginalis 6420B s 4 1
Gardnerella vaginalis 1500E s 4 1
Gardnerella vaginalis 00703Dmash s 4 1
Gardnerella vaginalis 6119V5 s 4 1
Stigmatella aurantiaca DW4/3-1 s 8 2
Streptomyces turgidiscabies Car8 s 4 1
Gardnerella vaginalis JCP8151B s 4 1
Gardnerella vaginalis JCP8151A s 4 1
Gardnerella vaginalis JCP7672 s 4 1
Gardnerella vaginalis JCP7276 s 4 1
Gardnerella vaginalis JCP8522 s 4 1
Gardnerella vaginalis JCP8070 s 4 1
Succinimonas amylolytica DSM 2873 s 4 1
Bifidobacterium choerinum DSM 20434 s 13 3
Bifidobacterium gallicum DSM 20093 = LMG 11596 s 17 4
Bifidobacterium choerinum DSM 20434 s 8 2
Scardovia inopinata F0304 s 4 1
Parascardovia denticolens F0305 s 4 1
Paenibacillus sonchi X19-5 s 13 3
Arthrobacter sp. M2012083 s 4 1
Paenibacillus sp. Aloe-11 s 4 1
Gardnerella vaginalis ATCC 14018 = JCM 11026 s 4 1
Paenibacillus polymyxa s 4 1
Paenibacillus riograndensis SBR5 s 13 3
Gardnerella vaginalis 5-1 s 4 1
Gardnerella vaginalis AMD s 4 1
Gardnerella vaginalis 101 s 4 1
Paenibacillus sp. HGH0039 s 4 1
Paenibacillus mucilaginosus 3016 s 13 3
Paenibacillus polymyxa E681 s 8 2
Stigmatella aurantiaca DW4/3-1 s 8 2
Streptomyces brasiliensis s 4 1
Bifidobacterium cuniculi s 8 2
Bifidobacterium gallicum DSM 20093 = LMG 11596 s 17 4
Bifidobacterium pseudolongum subsp. globosum s 17 4
Bifidobacterium adolescentis s 13 3
Paenibacillus polymyxa s 4 1
Streptomyces sp. PgraA7 s 4 1
Paenibacillus polymyxa s 4 1
Streptomyces europaeiscabiei s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus polymyxa s 4 1
Paenibacillus polymyxa s 4 1
Paenibacillus polymyxa s 4 1
Streptomyces griseus s 4 1
Paenibacillus polymyxa s 4 1
Paenibacillus polymyxa s 8 2
Gardnerella vaginalis s 4 1
Gardnerella vaginalis s 4 1
Bifidobacterium animalis s 4 1
Paenibacillus jilunlii s 13 3
Gardnerella vaginalis s 4 1
Paenibacillus polymyxa s 4 1
Bifidobacterium adolescentis s 4 1
Agromyces aureus s 4 1
Paenibacillus polymyxa s 4 1
Gardnerella vaginalis s 4 1
Streptomyces griseus s 4 1
Paenibacillus polymyxa s 4 1
Gardnerella vaginalis s 4 1
Gardnerella vaginalis s 4 1
Paenibacillus polymyxa s 8 2
Paenibacillus polymyxa s 4 1
Paenibacillus polymyxa s 8 2
Paenibacillus polymyxa s 4 1
Paenibacillus polymyxa s 4 1
Paenibacillus jilunlii s 13 3
Paenibacillus kribbensis s 4 1
Stigmatella aurantiaca s 8 2
Streptomyces griseus s 4 1
Gardnerella vaginalis s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus odorifer s 4 1
Paenibacillus polymyxa s 4 1
Paenibacillus polymyxa s 4 1
Gardnerella vaginalis s 4 1
Streptomyces scabiei s 4 1
Streptomyces scabiei s 4 1
Gardnerella vaginalis ATCC 14019 s 4 1

*p=pathogen;s=symbiont