Metamenu

Genomes encoding eukaryotic-like proteins

PF01261 Xylose isomerase-like TIM barrel

Copy number in non-pathogens:
Mean=4.93 Stddev=5.39

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Rhizobium rhizogenes NBRC 13257 s 4 27
Rhizobium leguminosarum bv. viciae 3841 s 4 27
Rhizobium sullae s 5 34
[Clostridium] bolteae WAL-14578 s 4 27
[Clostridium] clostridioforme WAL-7855 s 4 27
[Clostridium] bolteae ATCC BAA-613 s 4 27
Rhizobium sp. AP16 s 4 27
Rhizobium leguminosarum bv. viciae 248 s 4 27
Rhizobium leguminosarum bv. phaseoli 4292 s 4 27
Rhizobium leguminosarum bv. viciae WSM1481 s 4 29
Rhizobium leguminosarum bv. viciae WSM1455 s 4 29
Rhizobium mongolense USDA 1844 s 4 27
Rhizobium leguminosarum bv. viciae GB30 s 4 30
Rhizobium leguminosarum bv. viciae Vh3 s 4 31
Rhizobium leguminosarum bv. viciae Ps8 s 4 27
Rhizobium leguminosarum bv. trifolii TA1 s 5 32
Runella zeae DSM 19591 s 4 30
Dyadobacter beijingensis DSM 21582 s 5 37
Rhizobium leguminosarum bv. viciae Vc2 s 5 34
Ruminococcus gauvreauii DSM 19829 s 4 31
Rhizobium leguminosarum bv. viciae UPM1131 s 4 30
Rhizobium sullae WSM1592 s 4 30
Rhizobium leguminosarum bv. viciae UPM1137 s 4 29
Rhizobium leguminosarum bv. phaseoli FA23 s 4 31
Rhizobium gallicum bv. gallicum R602sp s 4 29
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 4 28
[Clostridium] bolteae 90B7 s 4 27
[Clostridium] bolteae 90A9 s 4 30
[Clostridium] bolteae 90A5 s 4 27
[Clostridium] bolteae 90B3 s 4 30
[Clostridium] clostridioforme 90A6 s 4 27
[Clostridium] clostridioforme 90A4 s 4 27
[Clostridium] clostridioforme 90B1 s 4 27
[Clostridium] clostridioforme 90A1 s 4 27
[Clostridium] clostridioforme 90A3 s 4 27
[Clostridium] clostridioforme CM201 s 4 27
Rhizobium leguminosarum bv. trifolii CC278f s 4 28
Rhizobium leguminosarum bv. trifolii CC283b s 4 27
Dyadobacter fermentans DSM 18053 s 4 30
Agrobacterium radiobacter K84 s 4 31
Paenibacillus mucilaginosus 3016 s 4 28
Sinorhizobium fredii USDA 257 s 4 27
Agrobacterium rhizogenes s 4 27
Agrobacterium rhizogenes s 4 27
Rhizobium tropici s 4 31
Agrobacterium rhizogenes s 4 27
Rhizobium tropici s 4 29
Rhizobium tropici s 4 31
Agrobacterium rhizogenes s 4 27
Ensifer shofinae s 4 28
Eisenbergiella tayi s 4 28
Eisenbergiella tayi s 4 27
Eisenbergiella tayi s 4 27
Pantoea rwandensis s 4 28
Eisenbergiella tayi s 4 27
Sinorhizobium fredii NGR234 s 4 27

*p=pathogen;s=symbiont